Fig. 2. gnu DNA and deduced protein sequence (EMBL Accession Number
AJ557828). The genomic sequence of gnu from an isogenic y; cn bw
sp stock (Adams et al.,
2000) is shown with the exons in upper case and the predicted
amino acid sequence shown below the DNA sequence. The consensus splice sites
are in italic and the polyadenylation signal is doubly underlined. The site of
the C to T mutation on the gnu chromosome (base 709) is indicated by
a solid black box. The ESTs GM10421 and LD12084 begin at bases 141 and 151
respectively (denoted by ). On sequencing gnu from OregonR and
from our genomic rescue construct the following polymorphisms were found: 91
T
C and 113 G
A, 165 extra T in our genomic rescue construct
(numbers refer to bases with y; cn bw sp version first and
polymorphism second). All of these polymorphisms are in untranslated regions
except 324 C
A in OregonR which is a silent mutation in the coding
sequence. Overall there is no polymorphism in the deduced protein sequence.
The residues altered in the production of gnuSTOP (boxed), were 692
C
A and 694 A
T, resulting in a premature TAG stop codon in place of
the lysine at 142 and a SpeI site (ACTAGT).