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Fig. 1. (A) ClustalW alignment of the predicted amino acid sequences of zebrafish Lmx1b.1, Lmx1b.2 and chick Lmx1b. Identical residues are shaded and dashes indicate predicted gaps. Arrows indicate the positions of the residues against which degenerate primers were designed. (B) Matrix of amino acid sequence comparisons among Lmx sequences from zebrafish (z), chick (c), human (hu), mouse (m) and hamster (ha). Percentages of identical and, in brackets, similar residues are given. (C) Phylogenetic relationships among several Lmx protein sequences. Both zebrafish Lmx genes obtained in our screen cluster with other Lmx1b orthologs. A putative zebrafish Lmx1a ortholog (put zLmx1a) found in the Ensembl Zebrafish Genome Server (ENSDARP00000006532) clusters with Lmx1a orthologs. Numbers represent bootstrap values for each branchpoint. Accession numbers: zLmx1b.1, AY894989; zLmx1b.2, AY894990; cLmx1b, P53413; huLmx1b, CAI40918 mLmx1b, NP034855; huLmx1a, CAH73258 mLmx1a, Q9JKU8; haLmx1a, X81406.