|
|
|
|||
| Home Help Feedback Subscriptions Archive Search Table of Contents | ||||
Development, Vol 124, Issue 10 2007-2014, Copyright © 1997 by Company of Biologists
JOURNAL ARTICLES |
SK Chan, HD Ryoo, A Gould, R Krumlauf and RS Mann
Department of Biochemistry and Molecular Biophysics, Center for Neurobiology and Behavior, Columbia University, New York, NY 10032, USA.
The homeodomain proteins encoded by the Hox complex genes do not bind DNA with high specificity. In vitro, Hox specificity can be increased by binding to DNA cooperatively with the homeodomain protein extradenticle or its vertebrate homologs, the pbx proteins (together, the PBC family). Here we show that a two basepair change in a Hox-PBC binding site switches the Hox-dependent expression pattern generated in vivo, from labial to Deformed. The change in vivo correlates with an altered Hox binding specificity in vitro. Further, we identify similar Deformed-PBC binding sites in the Deformed and Hoxb-4 genes and show that they generate Deformed or Hoxb-4 expression patterns in Drosophila and mouse embryos, respectively. These results suggest a model in which Hox-PBC binding sites play an instructive role in Hox specificity by promoting the formation of different Hox-PBC heterodimers in vivo. Thus, the choice of Hox partner, and therefore Hox target genes, depends on subtle differences between Hox-PBC binding sites.
This article has been cited by other articles:
![]() |
M. Dixit, E. Ansseau, A. Tassin, S. Winokur, R. Shi, H. Qian, S. Sauvage, C. Matteotti, A. M. van Acker, O. Leo, et al. DUX4, a candidate gene of facioscapulohumeral muscular dystrophy, encodes a transcriptional activator of PITX1 PNAS, November 13, 2007; 104(46): 18157 - 18162. [Abstract] [Full Text] [PDF] |
||||
![]() |
S. Merabet, M. Saadaoui, N. Sambrani, B. Hudry, J. Pradel, M. Affolter, and Y. Graba A unique Extradenticle recruitment mode in the Drosophila Hox protein Ultrabithorax PNAS, October 23, 2007; 104(43): 16946 - 16951. [Abstract] [Full Text] [PDF] |
||||
![]() |
C. M. Walsh and S. B. Carroll Collaboration between Smads and a Hox protein in target gene repression Development, October 15, 2007; 134(20): 3585 - 3592. [Abstract] [Full Text] [PDF] |
||||
![]() |
A. Granger, C. Bleux, M.-L. Kottler, S. J. Rhodes, R. Counis, and J.-N. Laverriere The LIM-Homeodomain Proteins Isl-1 and Lhx3 Act with Steroidogenic Factor 1 to Enhance Gonadotrope-Specific Activity of the Gonadotropin-Releasing Hormone Receptor Gene Promoter Mol. Endocrinol., September 1, 2006; 20(9): 2093 - 2108. [Abstract] [Full Text] [PDF] |
||||
![]() |
S. Tumpel, F. Cambronero, L. M. Wiedemann, and R. Krumlauf Evolution of cis elements in the differential expression of two Hoxa2 coparalogous genes in pufferfish (Takifugu rubripes) PNAS, April 4, 2006; 103(14): 5419 - 5424. [Abstract] [Full Text] [PDF] |
||||
![]() |
E. Ferretti, F. Cambronero, S. Tumpel, E. Longobardi, L. M. Wiedemann, F. Blasi, and R. Krumlauf Hoxb1 Enhancer and Control of Rhombomere 4 Expression: Complex Interplay between PREP1-PBX1-HOXB1 Binding Sites Mol. Cell. Biol., October 1, 2005; 25(19): 8541 - 8552. [Abstract] [Full Text] [PDF] |
||||
![]() |
B. M. Hersh and S. B. Carroll Direct regulation of knot gene expression by Ultrabithorax and the evolution of cis-regulatory elements in Drosophila Development, April 1, 2005; 132(7): 1567 - 1577. [Abstract] [Full Text] [PDF] |
||||
![]() |
A. Ebner, C. Cabernard, M. Affolter, and S. Merabet Recognition of distinct target sites by a unique Labial/Extradenticle/Homothorax complex Development, April 1, 2005; 132(7): 1591 - 1600. [Abstract] [Full Text] [PDF] |
||||
![]() |
S. Merabet, F. Catala, J. Pradel, and Y. Graba A Green Fluorescent Protein Reporter Genetic Screen That Identifies Modifiers of Hox Gene Function in the Drosophila Embryo Genetics, September 1, 2002; 162(1): 189 - 202. [Abstract] [Full Text] [PDF] |
||||
![]() |
T. C. Voss and R. N. Day Editorial: Pitx-2 Mutants and Somatolactotroph Gene Regulation--Deciphering the Combinatorial Code Endocrinology, August 1, 2002; 143(8): 2836 - 2838. [Full Text] [PDF] |
||||
![]() |
M. Manzanares, S. Bel-Vialar, L. Ariza-McNaughton, E. Ferretti, H. Marshall, M. M. Maconochie, F. Blasi, and R. Krumlauf Independent regulation of initiation and maintenance phases of Hoxa3 expression in the vertebrate hindbrain involve auto- and cross-regulatory mechanisms Development, September 15, 2001; 128(18): 3595 - 3607. [Abstract] [Full Text] [PDF] |
||||
![]() |
Y. Zhao and S. S. Potter Functional specificity of the Hoxa13 homeobox Development, August 15, 2001; 128(16): 3197 - 3207. [Abstract] [Full Text] [PDF] |
||||
![]() |
D. Prevot, T. Voeltzel, A.-M. Birot, A.-P. Morel, M.-C. Rostan, J.-P. Magaud, and L. Corbo The Leukemia-associated Protein Btg1 and the p53-regulated Protein Btg2 Interact with the Homeoprotein Hoxb9 and Enhance Its Transcriptional Activation J. Biol. Chem., January 7, 2000; 275(1): 147 - 153. [Abstract] [Full Text] [PDF] |
||||
![]() |
A Nasiadka, A Grill, and H. Krause Mechanisms regulating target gene selection by the homeodomain-containing protein Fushi tarazu Development, January 7, 2000; 127(13): 2965 - 2976. [Abstract] [PDF] |
||||
![]() |
K. Shanmugam, N. C. Green, I. Rambaldi, H. U. Saragovi, and M. S. Featherstone PBX and MEIS as Non-DNA-Binding Partners in Trimeric Complexes with HOX Proteins Mol. Cell. Biol., November 1, 1999; 19(11): 7577 - 7588. [Abstract] [Full Text] [PDF] |
||||
![]() |
H. D. Ryoo and R. S. Mann The control of trunk Hox specificity and activity by Extradenticle Genes & Dev., July 1, 1999; 13(13): 1704 - 1716. [Abstract] [Full Text] |
||||
![]() |
E. Wiellette, K. Harding, K. Mace, M. Ronshaugen, F. Wang, and W McGinnis spen encodes an RNP motif protein that interacts with Hox pathways to repress the development of head-like sclerites in the Drosophila trunk Development, January 12, 1999; 126(23): 5373 - 5385. [Abstract] [PDF] |
||||
![]() |
X Li, A Veraksa, and W McGinnis A sequence motif distinct from Hox binding sites controls the specificity of a Hox response element Development, January 12, 1999; 126(24): 5581 - 5589. [Abstract] [PDF] |
||||
![]() |
H. Ryoo, T Marty, F Casares, M Affolter, and R. Mann Regulation of Hox target genes by a DNA bound Homothorax/Hox/Extradenticle complex Development, January 11, 1999; 126(22): 5137 - 5148. [Abstract] [PDF] |
||||
![]() |
N. C. Green, I. Rambaldi, J. Teakles, and M. S. Featherstone A Conserved C-terminal Domain in PBX Increases DNA Binding by the PBX Homeodomain and Is Not a Primary Site of Contact for the YPWM Motif of HOXA1 J. Biol. Chem., May 22, 1998; 273(21): 13273 - 13279. [Abstract] [Full Text] [PDF] |
||||
![]() |
Z Liang and M. Biggin Eve and ftz regulate a wide array of genes in blastoderm embryos: the selector homeoproteins directly or indirectly regulate most genes in Drosophila Development, January 11, 1998; 125(22): 4471 - 4482. [Abstract] [PDF] |
||||
![]() |
M. Biggin and W McGinnis Regulation of segmentation and segmental identity by Drosophila homeoproteins: the role of DNA binding in functional activity and specificity Development, January 11, 1997; 124(22): 4425 - 4433. [Abstract] [PDF] |
||||
![]() |
D. Penkov, S. Tanaka, G. Di Rocco, J. Berthelsen, F. Blasi, and F. Ramirez Cooperative Interactions between PBX, PREP, and HOX Proteins Modulate the Activity of the alpha 2(V) Collagen (COL5A2) Promoter J. Biol. Chem., May 26, 2000; 275(22): 16681 - 16689. [Abstract] [Full Text] [PDF] |
||||