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Fig. 1. Distribution of AP+ cells in all 278 ears (A), all sequenced picks from 29
ears (B) and representative infected ears (C-F). (A,B) Each row indicates an
individual ear, sorted (A) by stage of virus delivery, shown along the left
edge, and (B) by clonal relationships of interest. Vertical columns depict the
parts of the ear. Within each row, gray regions are AP negative and black
regions have one or more AP+ cells that did not yield clonal information
(either because of lack of PCR product or because the samples were not
picked). Red regions have one or more sequenced picks that are related to
sequenced cells located in another region. In other words, the red bars show
the distribution of clones with dispersed members. Blue regions have at least
one sequenced pick that is not related to picks from other regions of the same
ear. (C-F) Schematics showing the distribution of clones for four individual
ears. Similar schematics are shown in subsequent figures. Within each ear,
different symbols depict separate clones. Grey circles indicate sequenced
picks unrelated to any other picks; i.e. each grey circle is a separate clone.
Ears are oriented with medial to the left and dorsal to the top. Left ears are
flipped for uniform orientation. Unsequenced AP+ cells are not indicated.
Abbreviations: AG, acoustic ganglion and nerve; VG, vestibular ganglion and
nerve; UM, utricular macula; SM, saccular macula; LM, lagenar macula; SC,
superior crista; LC, lateral crista; PC, posterior crista; BP, basilar
papilla; ULJ, utricle-lateral ampulla junction; ED, endolymphatic duct; ES,
endolymphatic sac; NS-UT, non-sensory part of the utricle; NS-Sac, non-sensory
part of the saccule; NS-CD, non-sensory part of the cochlear duct; SSC,
semicircular canal and ampulla; mes, periotic mesenchyme; GG, geniculate
ganglion; PTO, paratympanic organ; SE, sensory epithelium; NS, non-sensory
epithelium. Cells in the proximal facial ganglion are included in VG due to
difficulty in distinguishing the two structures.
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