First published online October 30, 2006
doi: 10.1242/10.1242/dev.02639
Development 133, 4393-4397 (2006)
Published by The Company of Biologists 2006
Transcription saga tells developmental stories
Barbara J. Graves1 and
John W. Tamkun2
1 Department of Oncological Sciences, Huntsman Cancer Institute, University of
Utah, Salt Lake City, UT 84112, USA.
2 Department of Molecular, Cell and Developmental Biology, University of
California, Santa Cruz, Santa Cruz, CA 95064, USA.

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Fig. 1. A model for the structure of the RNA polymerase II transcription
pre-initiation complex. The structure of RNA PolII (white), TFIIB
(yellow), TBP (green) and promoter DNA, where the positions of the protein and
DNA have been deduced from site-specific hydroxyl radical cleavage and
photocrosslinking. The blue patches on the surface of RNA PolII are hydroxyl
radical cleavage sites derived from Fe-EDTA probes inserted in the DNA
backbone. The highlighted base pair (purple and red) is the presumed
initiation site for DNA-strand separation. Modified, with permission, from
Miller and Hahn (Miller and Hahn,
2006 ).
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Fig. 2. Organization of the chromatin fiber by gypsy insulators. A
model of insulator sites forming an insulator body in the nucleus of
interphase cells. The interior of the nucleus is represented in gray, the
nuclear lamina is depicted in red, and the nuclear membrane and cytoplasm are
indicated in light blue. Dark blue, green, purple and yellow spheres represent
various gypsy insulator proteins. The chromatin fiber is shown in
gold. Image courtesy of Victor Corces.
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Fig. 3. Multiphoton microscopy imaging of a polytene nucleus. Multiphoton
microscopy imaging of a polytene nucleus resolves individual, native, genetic
loci and enables transcription factors involved in gene activation to be
watched in real time. In the two 3D reconstruction images of a cell nucleus
from Drosophila salivary gland tissues shown, heat-shock factor
(green) resides in the nucleoplasm at room temperature (22°C, left). Upon
heat shock (36.5°C, right), it rapidly associates with chromosomes (red)
to activate the transcription of heat-shock genes. Image courtesy of John
Lis.
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© The Company of Biologists Ltd 2006