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First published online 5 January 2006
doi: 10.1242/dev.02201


Development 133, 559-568 (2006)
Published by The Company of Biologists 2006


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A dominant-negative form of the E3 ubiquitin ligase Cullin-1 disrupts the correct allocation of cell fate in the neural crest lineage

Jana Voigt and Nancy Papalopulu*

The Wellcome Trust/Cancer Research UK Gurdon Institute, Tennis Court Road, Cambridge, CB2 1QR, UK and Department of Anatomy, Downing Site, University of Cambridge, Cambridge, CB2 3DY, UK.



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Fig. 1. Sequence and constructs for Xenopus Cullin-1. (A) Protein alignment of the mouse, human and X. tropicalis Cullin-1. The full-length protein is 99.6% identical at the amino acid level. The Rbx-1- and Skp1-binding domains are boxed in red and blue, respectively. (B) Diagrammatic representation of Cullin-1 constructs. Two C-terminally truncated versions of Cullin-1 were used. Cul1-C75 and Cul1-C477 are missing 75 and 477 amino acids from the C terminus respectively (C-terminal truncations indicated by purple bars in A). As a consequence, Cul1-C477 contains none and Cul1-C75 only contains a subset of the Rbx-1-binding sites. Moreover, lysine 720, the neddylation site (green star in A) is missing in both constructs. These constructs should lose or have reduced binding ability to Rbx-1, one of the components of the SCF complex, and are likely to interfere with the correct formation of the endogenous SCF. A fourth construct (N148-Cul1-C477), missing the 148 N-terminal and the 477 C-terminal amino acids, was also created. This deletes both the Skp-1- (yellow) and the Rbx-1- (red) binding domains and should not interfere with the endogenous SCF complex. (C) A wild-type SCF complex (with its substrate ß-catenin) versus a complex based on the truncated Cullin proteins (Cul1-C75). In the wild-type scenario, Cullin proteins provide the bridge between the F-box protein that binds ß-catenin and the E2 conjugating enzyme that supplies ubiquitin molecules. The truncation is likely to inhibit the interaction between the Cul1-C75 and Rbx-1/E2, hence preventing SCF function. Polyubiquitination of ß-catenin is shown by a series of grey circles, which are missing in the Cul1-C75-based SCF complex.

 


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Fig. 2. Expression analysis of Cullin-1. (A) RNA expression pattern of Cullin-1 during early X. tropicalis development. Cullin-1 is ubiquitous at blastula (1, lateral view) and gastrula (2, vegetal, 3, animal view) stages. At neurula stages (4, anterior view) it becomes enriched in neural tissue. At tadpole stages, it becomes enriched in the neural tube, eye and branchial arches (5+6, anterior towards the left, dorsal upwards). (B) Cullin-1 protein presence during development. Westerns with an anti-Cullin-1 antibody were carried out on protein extracts of whole X. laevis embryos at different developmental stages. Cullin-1 protein is found throughout development. Cullin-1 protein levels are slightly increased during late neurula/early tadpole stages.

 


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Fig. 3. Cul1-C75 and Cullin-1 RNA injections increase the level of ß-catenin in the Xenopus embryo. (A) 1.6 or 2.5ng of Cul1-C75 (truncated) capped RNA were injected animally into each blastomere of two-cell stage X. laevis embryos. Proteins were extracted at stage 10 and analysed for ß-catenin levels. Injection led to an upregulation of ß-catenin levels. Blots were stripped and analysed against {alpha}-tubulin as a loading control. (B) The same was carried out for full-length Cullin-1 RNA. Embryos were analysed at stage 8 and surprisingly an upregulation of ß-catenin levels was also observed. (C) ß-Catenin levels were also analysed at stage 19 (neurula stage), a time during which neural crest tissue becomes specified. As at stage 8 and 10, injections of 1.6 and 2.5 ng of either the Cul1-C75 and the full-length Cullin-1 lead to an increase in ß-catenin levels. This was also found for stage 24 (data not shown). To determine whether both constructs are translated correctly, western blots were stripped and subsequently analysed for Cullin-1 protein levels (with an antibody raised towards Cullin-1's N-terminus). The full-length Cullin-1 RNA (lane 4 and 5) results in higher levels of proteins of the correct size when compared with uninjected embryos (lane 1). A clear size difference between Cul1-C75 and Cullin-1 is also visible. (D) A wide range of Cullin-1 RNA doses were injected (10 pg-3 ng into each blastomere at the two-cell stage) and embryos were analysed at stage 10. A decrease in ß-catenin was never observed; indeed the increase of ß-catenin correlates with the increased dose of Cullin-1 injection.

 


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Fig. 4. Cullin-1, Cul1-C75 and Cul1-C477 decrease ß-catenin ubiquitination in cell lines. H293T cells were transfected with Myc-His-Ubiquitin, HA-catenin and either Cul1-C477, Cullin-1 or Cul1-C75. After 36 hours, 10 µM MG132 (a proteasome inhibitor) was added for 12 hours to accumulate ubiquitinated protein. All ubiquitinated protein was immunoprecipitated (IP) via Myc. Ubiquitinated ß-catenin was visualised with an anti-HA antibody. Co-expression of any of the Cullin-1 gene constructs led to a reduction of the levels of ubiquitinated ß-catenin. The severity of reduction corresponded to the amount of truncation, with the most truncated construct Cul1-C477 causing the most severe reduction (lane 3 IP), the Cul1-C75 (lane5) causing a strong reduction and full-length Cullin-1 (lane 4) causing some reduction. This suggests that Cullin1, Cul1-C75 and Cul1-C477 inhibit ß-catenin ubiquitination, probably by inhibiting the endogenous SCF complex. As a control, ~10% of the lysate was removed previous to the IP and analysed for total levels of ß-catenin by anti-HA staining. Co-transfection of Cullin-1 led to increased ß-catenin levels in the lysate control in 4/6 experiments (not shown here). An increase in total ß-catenin is not always detected in these experiments because of the high levels of exogenous ß-catenin and because the ubiquitinated form is only a fraction of the total ß-catenin.

 


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Fig. 5. Comparative dose response of Cul1-C75 and Cullin-1 in inducing developmental abnormalities. Embryos were injected with different doses of Cul1-C75 or Cullin-1 RNA animally into one blastomere at two-cell stage and grown to tadpole stages (stage 39/40). Morphological analysis was carried out by comparing the uninjected with the injected side and embryos were scored for defects. The phenotype predominantly consisted of ectopic melanocytes, ectopic tissue (such as epidermal folds), eye defects and secondary axes. The most robust phenotype was ectopic melanocytes, which could be seen in almost all of the injected embryos. The dose of RNA injected correlates with the penetrance of the phenotype. The truncated Cullin-1 construct (Cul1-C75) was more potent at causing a phenotype than the full-length construct.

 


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Fig. 6. Phenotypes observed in Cul1-C75 and Cullin-1 injected embryos. (A) Wild-type embryo for comparison. The most striking phenotype observed was an increase in melanocytes (B), but eye defects (C, star represents where the eye should be) and secondary axes (D) were also commonly observed (see Fig. 5 for quantification). Embryos were hybridised in situ with a probe for N-tubulin, a marker for differentiated neurons (purple). Ectopic N-tubulin can be observed in the secondary axis (D). The lineage tracer lacZ (light-blue staining) indicates the area of injection. Lateral view with anterior towards the left and dorsal towards the top. The injected side is shown. Transverse sections of the embryos show clearly the large upregulation of melanocytes (E-G) and the ectopic tissue (white arrowhead) in the injected side. Neural differentiation in the neural tube is not affected (as marked by N-tubulin); however, cranial ganglia neurons (N-tubulin positive, arrows) are absent (compare B,C with A and E,F with control side). Transverse view with dorsal towards the top and the injected side on the right.

 


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Fig. 7. Phenotype of a severely C-terminally truncated form of Cullin1, Cul1-C477. In order to ensure that the C-terminally truncated Cul1-C75 does not act as wild-type form of Cullin-1, we made a Cullin-1 construct (Cul1-C477) that is lacking all of the C terminus (Fig. 1B). A 250 pg dose of this construct together with the lineage tracer lacZ (light blue) were injected animally at the two-cell stage into X. laevis embryos. Embryos were analysed at tadpole stages for morphological defects. Injected embryos (A-C,E) showed an accumulation of melanocytes (A-C, arrow in C), secondary axes (B) and ectopic tissue (C), all phenotypes previously observed with the other Cullin-1 constructs. For comparison, uninjected control embryos are shown (D,F). This indicates that all of these constructs act in the same manner, which is most likely to be a dominant-negative mechanism. All embryos are shown laterally. In A-D, anterior is towards the left; in E,F, embryos are facing each other.

 


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Fig. 8. Cul1-C75 RNA injections increase early neural crest markers. (A) Embryos were injected with 500 pg of Cul1-C75 or Cullin-1 (same phenotype, but not shown) plus the lineage tracer lacZ (light blue) into one blastomere at the two-cell stage. As a control, 500 pg lacZ RNA was injected alone. Embryos were grown to neurula stage and analysed for the early neural crest markers Sox9, Sox10, Slug and Zic3 (purple). Expression of all markers was expanded, predominantly into the anterior neural plate. In some cases, expression of Sox9 and Sox10 were reduced (not shown). Dorsal view with anterior towards the top. (B) When injections were targeted to the anterior neural plate, expression of Sox3 (a marker for proliferating neural tissue) was reduced. This was in the same region where the expansion of neural crest markers (as shown for Sox9) was seen. Dorsal view with anterior towards the top.

 

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© The Company of Biologists Ltd 2006