doi: 10.1242/10.1242/dev.00455
Development 130, 2543-2554 (2003)
Copyright © 2003 The Company of Biologists Limited
Zebrafish foxi one modulates cellular responses to Fgf signaling required for the integrity of ear and jaw patterning
Robert M. Nissen1,
Jizhou Yan2,
Adam Amsterdam1,
Nancy Hopkins1 and
Shawn M. Burgess2,*
1 Center for Cancer Research and Department of Biology, Massachusetts Institute
of Technology, Cambridge, MA 02139, USA
2 Genome Technology Branch, National Human Genome Research Institute, National
Institutes of Health, Bethesda, MD 20892, USA
*
Author for correspondence (e-mail:
burgess{at}nhgri.nih.gov)
Accepted 20 February 2003
 |
SUMMARY
|
|---|
We identified four insertional alleles of foxi one (foo),
an embryonic lethal mutation in zebrafish that displays defects in both otic
placode and the jaw. In foo/foo embryos the otic placode is split
into two smaller placodes and mutant embryos show a dorsoventral (DV)
cartilage defect manifested as a reduced hyomandibular and reduced third and
fourth branchial arches. We identified foxi one (foo), the
zebrafish ortholog of Foxi1 (FREAC6, FKHL10, HFH-3, Fkh10) and a member of the
forkhead domain transcriptional regulator family, as the gene mutated in
foo/foo embryos. foo is expressed in otic placode precursor
cells, and foo/foo embryos lack placodal pax8 expression and
have disorganized otic expression of pax2.1 and dlx3. Third
stream neural crest cell migration, detected by dlx2 and
krox20 expression, is aberrant in that it invades the otic placode
territory. foo is expressed in pharyngeal pouch endoderm and is
required for pouch expression of pax8 and proper patterning of other
markers in the pouch such as nkx2.3. In foo/foo embryos, we
observed a failure to maintain fgf3 expression in the pouches,
followed by apoptosis of neural crest cells in adjacent arches. We conclude
that foo expression is essential for pax8 expression
probably downstream of Fgf signaling in a conserved pathway jointly required
for integrity of patterning in the otic placode and pharyngeal pouches. We
propose that correct placement of survival/proliferation cues is essential for
shaping the pharyngeal cartilages and that evolutionary links between jaw and
ear formation can be traced to Fgf-Foxi1-Pax8 pathways.
Key words: Foxi1, Otic placode, Pharyngeal pouch, fgf8, fgf3, pax8
 |
INTRODUCTION
|
|---|
We are using the zebrafish to study the genetic basis of ear and jaw
development. Development of the zebrafish ear begins as a thickening of the
epidermal layer into a two-cell-thick placode at the nine-somite stage
(Kimmel et al., 1995
). The
placode cavitates to form a lumen and hair cells begin to differentiate,
projecting bristles into the liquid filled interior
(Haddon and Lewis, 1996
). Over
the next few days, columns of tissue grow out from the walls of the otic
vesicle, fusing in the center of the space to generate semicircular canals.
Many genes have been shown either to be expressed in the developing zebrafish
ear, or to be involved in the proper formation of the organ
(Whitfield et al., 2002
).
pax2a and dlx3b are expressed in the developing placodes and
roles in ear development for each of these genes have been demonstrated or
inferred (Krauss et al., 1991
;
Lun and Brand, 1998
;
Solomon and Fritz, 2002
). Fgf3
and Fgf8 have been implicated directly in the induction of the otic placode
(Leger and Brand, 2002
;
Maroon et al., 2002
;
Phillips et al., 2001
).
Inhibition of either one of these signaling molecules causes marked reductions
in the size of the placode, while inhibiting both causes an elimination of the
ear primordia. pax8 is the earliest known molecular marker for cells
that will become the otic placode, but its actual role in induction is not
known (Pfeffer et al.,
1998
).
As in all vertebrates, the zebrafish ear serves the dual functions of
linear acceleration detection and hearing
(Bever and Fekete, 2002
).
Although functionally similar to the human ear, many structures are not
present including the cochlea and middle ear. Remarkably, the middle ear
structures first arose during the water-to-land transition and their origins
are believed to be structures derived from the gills (spiracular pouch) and
the jaw (hyomandibular bone) of fish
(Webster et al., 1992
).
The pharyngeal cartilages are derived from three streams of ventrolaterally
migrating cranial neural crest (NC) cells. The pharyngeal skeleton shows both
an anterior-to-posterior (AP) segmented polarity, with each segment deriving
from an embryonic pharyngeal arch, as well as a dorsal-to-ventral (DV)
polarity within individual AP segments
(Trainor and Krumlauf, 2001
).
The first mandibular arch gives rise to a ventral Meckel's cartilage, which
articulates with a dorsal palatoquadrate. The second hyoid arch is serially
homologous to the first arch with a ventral ceratohyal that articulates via
the interhyal with the hyosymplectic. The hyosymplectic is composed of a
ventral symplectic rod region and a dorsal plate-like hyomandibular region.
The arches and pouches form dynamically with the ectoderm forming an AP series
of bilateral surface `in-pockets' complementary to bilateral endodermal
out-pockets that together form the pharyngeal pouches separating adjacent
arches along the AP axis. The migratory NC cells fill the spaces between the
forming pouches adopting a cylindrical morphology encasing central cores of
paraxial mesoderm (Kimmel et al.,
2001
).
Pharyngeal pouches likely signal to adjacent NC cells
(Le Douarin and Ziller, 1993
;
Veitch et al., 1999
) and
essential roles for endothelin1 (edn1) in forming ventral
cartilages has been shown in zebrafish and mice
(Clouthier et al., 1998
;
Kurihara et al., 1994
;
Miller et al., 2000
). Evidence
for a dorsal cartilage-patterning signal is provided by the zebrafish
fgf8 mutant, acerebellar (ace), which has a reduced
hyomandibular region. However, early neural tube defects and absence of
ace expression in the pouches makes interpretation difficult
(Roehl and Nusslein-Volhard,
2001
). Studies on zebrafish casanova (cas)
mutants and Fgf3 morpholino antisense oligonucleotide knockdowns suggest that
loss of Fgf3 pouch expression results in early apoptotic elimination of
posterior NC cells (Alexander et al.,
1999
; David et al.,
2002
). How an Fgf signal might function in DV patterning within an
arch is still unclear.
In a large, insertional mutagenesis screen performed at MIT
(Amsterdam et al., 1999
;
Golling et al., 2002
), we
isolated four insertional alleles of the zebrafish ortholog of the forkhead
related transcription factor Foxi1 (FREAC6, FKHL10, HFH-3, Fkh10)
(Avraham et al., 1995
;
Chen et al., 2002
;
Clevidence et al., 1993
;
Hulander et al., 1998
;
Larsson et al., 1995
) that
show specific defects in both ear and jaw development. The otic placodes are
severely reduced in size, often split into two smaller placodes, and the
semicircular canals fail to form properly, often resulting in a single large
cavity instead of the normal three distinct chambers. The dorsal first arch
derivative, the palatoquadrate, is mildly reduced in mutant animals, whereas
the ventral Meckel's cartilage is indistinguishable from wild type. The dorsal
second arch derivative, the hyomandibular region, is severely reduced in
mutant animals while the ventral symplectic rod region and ceratohyal appear
only mildly affected. Of the posterior arches, the third and fourth arches
show substantial variable reductions while the fifth to seventh branchial arch
cartilages appear relatively unaffected. Interestingly, targeted mutations of
Foxi1 in mice show defects in ear development and homozygous mutant mice are
born with both hearing and vestibular defects, as well as a lower survival
rate after birth (Hulander et al.,
1998
), suggesting some conservation of the developmental pathway
of the ears between zebrafish and mice.
 |
MATERIALS AND METHODS
|
|---|
Animal husbandry and cloning
Zebrafish were mutagenized, maintained and screened as previously described
(Amsterdam et al., 1999
). The
retroviral insertion junction fragment cloning and animal genotyping
procedures were as previously described
(Golling et al., 2002
;
Sun and Hopkins, 2001
). The
primers used for genotyping carrier fish and embryos were:
- 1359A-link1 5'-CCGAGGACGCGCTTAAATTGGC-3' and 1359A-link2
5'-GTCCACACACACACTGCATTTAAACATG-3' in combination with nLTR3
5'-CTGTTCCATCTGTTCCTGAC-3' for hi1321 and hi1359A;
- 1359A-link1 and 1321-0RT 5'-CTGATCCGTCCCGGTTGTATATGAGG-3' in
combination with RMN3'LTR 5'-GAGGAGACCCTCCCAAGGAACAG-3' for
hi3239;
- 1321-start 5'-CCATATGACCGTGTATTGCGACTCCAACTTC-3' and 3239-gap2
5'-AGACTGGAAGTGTCCGCCAATTTAAGC-3' in combination with
RMN3'LTR for hi3747.
- Full-length cDNA for zebrafish foo was isolated by 5'-RACE
and 3'-RACE as previously described
(Golling et al., 2002
). The
primers used for 5'RACE amplification were
5'-GATGGTGCAGGTTCTGCTGGTACATGCTG-3' followed by
5'-TCTGACCTGCTGAGTGTGCTCGTCTCTGAGG-3'. The primers used for
3'RACE amplification were 5'-GAGAAAAAGAAGAGCCGACGGAAAC-3'
followed by 5'-GTCTGTGAAATCCGAGGACGCG-3'.
Zebrafish BAC library screening
High-density filters to the CHORI-211 BAC library were hybridized with a
radioactive probe made from the EcoRI-digested plasmid containing a
partial foo cDNA. The positive BAC clones were identified by PCR
amplifications and used for fingerprinting and automated sequencing.
 |
RT-PCR
|
|---|
For RT-PCR analysis of foo gene expression in wild-type and mutant
animals, embryos were collected according to a previously described staging
method (Kimmel et al., 1995
)
and RNA was prepared using Trizol reagent (ROCHE) with subsequent first-strand
synthesis as previously described (Sun and
Hopkins, 2001
). The RT-PCR primers used for amplifying the
sequence containing all foo proviral insertion sites were 1321-start
and 1321-RT2 5'-CCTAAGATGACAAGAATGGGTGTTGG-3'. For RT-PCR
amplification of the internal non-flanking sequence the primers used were
3239-gap1 5'-CGCTCAGTCAGATTTATCAGTACGTGG-3' and 3239-gap2. The
primers used for amplifying the b-actin control sequence were
5'-CATCAGCATGGCTTCTGCTCTGTATGG-3' and
5'-GACTTGTCAGTGTACAGAGACACCCTG-3'.
Plasmids
The plasmid pCR2.1-foxi1 3'RACE was isolated by performing
3'RACE with the previously described primers. It was digested with
NotI and antisense probe for in situ hybridization synthesized using
T3 RNA polymerase as previously described
(Sun and Hopkins, 2001
).
Previously described plasmids for probes were hand2
(Angelo et al., 2000
),
dlx2 and dlx3b (Akimenko
et al., 1994
), gsc
(Schulte-Merker et al., 1994
),
krox20 (egr2 Zebrafish Information Network)
(Oxtoby and Jowett, 1993
),
nkx2.3 (Lee et al.,
1996
) and pax2a
(Krauss et al., 1991
). Plasmid
for making fgf3 probe was constructed by PCR amplification from 0-24
hpf cDNA using primers fgf3-f 5'-CTTGTTGTTACTGAGCTTCTTGGATCCGAG-3'
and fgf3-r 5'-CCTCCAGATTTCAGTGTCAAACAATGCC-3', followed by
subcloning into pCRII-BLUNT to yield pCR-fgf3. To make antisense probe,
pCR-fgf3 was digested with NotI and transcribed using SP6 RNA
polymerase. Plasmid for making pax8 probe was constructed by PCR
amplification from 0-24 hpf cDNA using primers pax8-f
5'-GCTTCCGGAGGTGATCCGGCAAAGG-3' and pax8-r
5'-CTGGAGTTGGTGAATCTCCAGGCCTCG-3' followed by subcloning into
pCRII-BLUNT to yield pCR-pax8. To make antisense probe, pCR-pax8 was digested
with BamHI and transcribed using T7 RNA polymerase.
Embryo injections
Embryos were injected at the one- to four-cell stages using pulled glass
needles and a picospritzer II (Parker Instrumentation) with the Fgf3-MO
(Phillips et al., 2001
).
Calibration of injection needles indicated an average injection volume of 1 nl
per 50 msecond pulse. Morpholino sequence was
5'-ACTCATGTTGACTACTCCTCCCACT-3'; four-base mismatch control was
5'-ACTCATCTTCACTACTGCTCCCAGT-3'.
In situ hybridization and immunohistochemistry
Whole-mount in situ hybridization was performed as previously described
(Thisse et al., 1994
).
Two-color reactions were performed as previously described
(Hauptmann and Gerster, 1995
;
Sun and Hopkins, 2001
).
Whole-mount immunohistochemistry was performed as previously described
(Hanneman et al., 1988
).
For TUNEL assays, fixed dehydrated embryos were rehydrated and acetone
permeabilized for 10 minutes at 20°C, then rehydrated in PBST,
washed in PBS + 0.25 mg/ml BSA and preincubated in TdT buffer for 2 hours at
room temperature. TdT/fluorescein-dUTP reactions (Roche product 1-767-291)
were incubated overnight at room temperature. Embryos were then washed twice
for 45 minutes in PBST+1 mM EDTA at 65°C, 4 times for 45 minutes in PBST
at room temperature, and processed with anti-fluorescein antibodies for
alkaline phosphatase activity as previously described
(Thisse et al., 1994
).
Cartilage staining
Alcian Blue staining was performed as previously described
(Golling et al., 2002
).
 |
RESULTS
|
|---|
The zebrafish foxi one mutation has ear defects
We first identified foxi one (foo) as a mutant with a
defect in ear development. The earliest morphologically detectable phenotype
was a reduction in the otic placode size at around the 15-somite stage, with
the placode appearing not only smaller, but split into two or more tiny
placodes. These tiny placodes can later either fuse or remain split
(Fig. 1B,D). When the placode
was split into two smaller regions, an otolith typically formed in each
otocyst (Fig. 1D).

View larger version (62K):
[in this window]
[in a new window]
|
Fig. 1. Mutations in zebrafish foxi one cause defects in otic vesicle
formation. (A) Lateral view of a wild-type embryo at 15 somites; inset is a
magnification of the otic placode. (B) foo/foo embryo at 15 somites;
arrows indicate putative placodes. (C) Wild-type ear at 28 hpf. (D)
foo/foo embryo at 28 hpf; otic vesicle is clearly split into two
smaller vesicles; arrows in inset indicate the two visible vesicles. (E) PCR
products from genomic DNA indicating wild-type and mutant alleles of
foo with the results of the linkage analysis in centimorgans. (F)
RT-PCR analysis of each allele was performed. Wild-type, w; mutant, m. Bands
marked foo use primers indicated by black arrows below; bands marked
`int' use primers indicated by red arrows. Integration for each allele is
marked by a black triangle. The intron and the forkhead (FKH)-related
DNA-binding domain are also indicated.
|
|
foo/foo embryos are mutated in the forkhead related
transcription factor Foxi1
Through established segregation analysis
(Amsterdam et al., 1999
), the
mutant phenotype was linked to a single proviral integration for each of four
independent isolates of foo (not shown). The genomic DNA adjacent to
the proviral integration events was cloned, sequenced, and used to determine
linkage of the insertions to the mutant phenotype
(Fig. 1E) (see
Golling et al., 2002
) All
alleles were crossed and failed to complement. Linkage data placed the
mutation responsible for the foo/foo mutant phenotype within 0.9 cM
of a proviral insertion. The sequences adjacent to all four proviruses show
identity to a single zebrafish EST (Accession Number BI891904). We isolated
several bacterial artificial chromosomes (BACs) and sequence from this genomic
region showed significant homology at the DNA and protein level to the mouse
forkhead related transcription factor Foxi1 (Fkh10) which has presumed
orthologs in several species, including human (Fkhl10, FREAC6), rat (HFH-3)
and frogs (Foxi1c). Among all species, including zebrafish, a genomic
structure of two exons with a single intron (in the same location) is
conserved (Fig. 1F). In one
allele, hi3747, the mutagenic provirus lies in sequences encoding a
poly-histidine stretch near the 5' end of the gene and should result in
a truncation before the conserved DNA-binding domain
(Fig. 1F). We performed RT-PCR
on mutant and wild-type embryos for each allele with two sets of primers: one
set spanning the entire gene and located outside all four viral integration
sites; and a second internal set that did not flank any of the viral
integration sites (Fig. 1F).
The longer amplicon was not successfully amplified from any of the alleles,
although a significantly reduced amount of RNA was detected with the smaller
amplicon in hi1321, hi3239 and hi3747. Almost no RNA was detected in the
hi1359A allele. In situ hybridization of foo antisense RNA to mutant
embryos was negative compared with wild-type siblings
(Fig. 2D,E), suggesting a
destabilized mRNA. The severity of the ear phenotype was variable within each
mutant line, making comparisons of allele strength difficult. However, the
allele with the most consistent phenotype was hi3747, the mutant with a
proviral integration closest to the 5' end of the gene and before the
DNA binding domain. In hi3747, the otic vesicles were substantially reduced
and often split (as in Fig.
1D).

View larger version (104K):
[in this window]
[in a new window]
|
Fig. 2. Early expression of foxi one in the developing embryo. (A,B)
Antisense RNA in situ hybridization of foo mRNA is first detected in
the dome stage of embryos. (A) Lateral view; (B) dorsal view. (C) Lateral view
of foo expression at the shield stage. (D) Lateral view 90% epiboly.
Arrow indicates foo expression in the otic placode precursors. (E)
Lateral view of a foohi3239/foohi3239 embryo,
90% epiboly. Arrow indicates loss of foo expression in the mutant
embryo. (F) Lateral view tailbud stage; arrow indicates otic placode
precursors expressing foo.
|
|
Antisense oligonucleotides using morpholino chemistry have been shown to be
effective, gene-specific, transcriptional inhibitors in zebrafish embryos
(Ekker, 2000
;
Nasevicius and Ekker, 2000
).
As further confirmation that mutations in the foo gene are
responsible for the observed phenotypes, we designed two morpholino antisense
oligonucleotides to foo mRNA and injected them into embryos. In 50%
of the embryos, the phenotype generated was indistinguishable from the mutant
alleles (39/78) in ear or jaw defects, while the control morpholino showed no
effect (data not shown).
Expression of Foxi1 in the early embryo
By RT-PCR, foo transcripts were not detected in unfertilized
oocytes but were readily detected by the sphere stage (data not shown).
Location of foo expression by in situ hybridization was first
detected at the dome stage (Fig.
2A,B). By the shield stage, expression was in the presumptive
ventral ectoderm near the animal pole that is fate mapped to be placodal
precursors (Fig. 2C)
(Kozlowski et al., 1997
;
Woo et al., 1995
). By 90%
epiboly, foo expression was split into bilateral regions
(Fig. 2D). As convergence
continued, foo expression appeared to be restricted to a region
destined to become the otic placode (Fig.
2F). Expression of foo precedes expression of
pax8, making it the earliest known marker of otic placode
formation.
Impact of foo mutations on otic placode patterning
Because of the early expression of foo in the developing otic
placode, we examined the expression in our mutant of other genes known to be
expressed early in the otic placode. Mutant embryos showed reduced expression
of dlx3b and pax2a that, in addition, was often split into
several small patches of expression (Fig.
3D,F,H, arrows). Expression of dlx3b and pax2a
in other areas of the developing embryo were unaffected
(Fig. 3D,F,H, arrowheads). The
strongest effect we detected was on the expression of pax8. At the
one-somite stage, no pax8 expression could be detected in the
presumptive otic placode of one quarter of the embryos
(Fig. 3B). However, we saw
normal expression of pax8 in the mesoderm of presumptive kidney
(Fig. 3B, arrowhead). This
suggests that foo is upstream of pax8 in the otic vesicle
and is required for proper expression of pax8 in this region.

View larger version (81K):
[in this window]
[in a new window]
|
Fig. 3. Effects of the foxi one mutation on otic placode markers. Right
panels, foo/foo homozygote embryos; left panels, same-clutch
wild-type siblings. (A,B) Lateral view of pax8 expression in
wild-type (A) and foo/foo (B) one-somite stage embryos.
Arrows indicate otic placode region. Arrowhead (B) indicates normal
presumptive kidney staining. (C,D) Lateral view of dlx3b staining in
one-somite stage wild-type (C) and a foo/foo (D) embryos. Note only
otic placode expression is altered in the mutant. (E,F) dlx3b
staining in 10-somite stage wild-type (E) and foo/foo (F) embryos.
Arrow in E indicates otic placode. Arrows in F indicate scattered staining.
(G,H) pax2a expression in 10-somite stage wild-type (G) and
foo/foo (H). Arrows indicate scattered otic placode expression in
mutant. Arrowheads indicate normal mid-hindbrain boundary and eye
expression.
|
|
foo/foo embryos display defects in neural crest cell
migration
dlx2 is normally expressed in all three streams of migratory NC
cells beginning around the two- to three-somite stage. NC cells migrating out
of rhombomere 5 (r5) normally move ventrally in a posteriolateral arc around
the otic placode (Fig. 4A,
arrow). Because the foo/foo mutant embryos displayed a significant
disruption in otic placode development, we examined markers of migratory
neural crest cells to determine whether disrupting the otic placode might
affect normal NC cell migration. In foo/foo embryos the intensity of
dlx2 expression was normal but the third stream NC cells appeared
slightly more anterior and no longer distinct from the second stream
(Fig. 4B, arrowhead).
krox20 is expressed only in third stream migratory NC cells exiting
r5. In foo/foo embryos, these NC cells migrated ventrolaterally, but
failed to make the posterior movements around the otic placode
(Fig. 4, compare C with D,
arrowheads). Many cells were observed migrating through the otic placode
region. Notably, the anterior margin of the post-migrating third stream NC
cells has only shifted minorly towards the anterior
(Fig. 4E,F arrows). In
addition, the migration of second stream NC cells was indistinguishable from
wild type, as visualized by ephrin B2a (efnb2a) expression
(data not shown). It is unclear whether these changes are the result of a
reduced otic placode or loss of foo expression. Cell transplantations
will be required to answer this question.

View larger version (122K):
[in this window]
[in a new window]
|
Fig. 4. foxi one mutants display defects in third stream neural crest
migration. Right panels, foo/foo homozygote embryos; left panels,
same-clutch wild-type siblings. (A,B) Dorsal view of dlx2 expression
in wild-type (A) and foo/foo (B) 10-somite stage embryos. Arrow in A
indicates third stream NC cell migration avoiding the otic placode territory.
Arrow in B indicates third stream NC cell invasion of the otic placode
territory. (C,E) Lateral (C) and dorsal (E) views of krox20 staining
in a 10-somite stage wild-type embryo. Arrows indicate NC cells streaming in a
posterior and lateral direction. (D,F) Lateral (D) and dorsal (F) views of a
10-somite stage foo/foo embryo. Arrow in D indicates NC cells
invading otic placode territory. Arrow in F indicates approximately normal
anterior border for krox20+ NC cells.
|
|
Impact of foxi one mutations on jaw development
By 5dpf, foo/foo embryos display significant defects in the
cartilaginous structures of the developing jaw
(Fig. 5A,B), observable from
both lateral and ventral views (Fig.
5C-F). Most notably in all hi3747 embryos, there is a severe
reduction of the hyomandibular region (Fig.
5C,D, labeled hm). As it is often difficult to see this reduction,
we flat-mounted the jaw cartilage to illustrate better the loss of the
hyomandibular (Fig. 5G,H). We
also saw variable reductions in the ceratohyals (ch) (strong example of
reduction in Fig. 5F), and
third and fourth gill arches (Fig.
5, numbers). Ceratohyal inversion is a common phenotype seen in
back arch mutants. Therefore, inversion of the ceratohyals in
foo/foo embryos probably results from the reduced third and
fourth arches. There is a subtle, but consistent reduction in the overall
measured size of the palatoquadrate (PQ)
(Fig. 5I), although there is no
apparent reduction in the more ventral Meckel's cartilage (M)
(Fig. 5I). The embryos die
after 6-7 days from unknown causes that are presumed to be related to the
phenotypes either observed or yet to be determined. Injection of high
concentration foo antisense morpholinos generated a morphant
phenocopy of the jaw defects (data not shown).

View larger version (83K):
[in this window]
[in a new window]
|
Fig. 5. foo mutants display defects in cartilages of the second, third and
fourth pharyngeal arches. (A,B) Lateral views of wild-type (A) and
foo/foo (B) embryos at 5 dpf. Arrow indicates jaw defects.
(C,D) Lateral views of wild-type (C) and foo/foo (D) embryos at 5
dpf; wholemounts, Alcian Blue stained cranial cartilages. Arrow in D indicates
the reduced hyomandibular region (hm) of the hyosymplectic. (E) Ventral view
of C. The ceratohyal (ch) is indicated and gill arches are numbered 3-7. (F)
Ventral view of D. The mildly reduced ch is indicated and arrows indicate the
severely reduced third and fourth arch cartilages. The remaining gill arches
5-7 are indicated. (G) Flatmount of animal in C. Arrow indicates the hm
region; line indicates the symplectic rod region (sy). The palatoquadrate
(pq), Meckel's (m) and ch are also indicated. (H) Flatmount of animal in D.
Arrow indicates the reduced hm while a line indicates the relatively normal
sy. In foo/foo flatmounts, the ch positions abnormally because of an
apparent defect in the articulation between ch and the hyosymplectic. (I)
Chart comparing the measured length of the palatoquadrate (PQ) and Meckel's
(M) cartilage in wild-type and foo mutant embryos. Measurements were
made of eight wild-type and six mutant embryos. The palatoquadrate shows a
small but measurable reduction in size in foo mutants.
|
|
Foxi1 expression during pharyngeal arch development
To begin to investigate the roles foo plays during jaw
development, we examined expression of foo at later developmental
time points. By the 10 somites stage, expression in the otic placode has faded
and a second region of expression more ventral and lateral is apparent
(Fig. 6A,B). Double staining of
10-somite stage embryos with krox20 and foo shows that a
stream of ventroanteriorly migrating foo-positive NC cells can be
detected that are probably second stream associated NC cells. These
foo-positive cells appear to initiate expression of foo as
they approach their ventrolateral destinations, and suggest that foo
is expressed in at least a subset of the post-migratory second stream NC
(Fig. 6E, arrows). Initiation
of foo expression was likewise detected among post-migratory third
stream NC cells. However, second arch associated NC cell expression of
foo is significantly downregulated by the 15-somite stage and no
longer detected by 24 hpf (Fig.
6B,D). By the 15-somite stage, foo expression is readily
detected in the region of what will be endodermal precursor cells of the first
and second pharyngeal pouches (pp1, pp2 in
Fig. 6B,C). foo
expression remains strong in this region at least until 32 hpf, with
downregulation proceeding in a medial-to-lateral and anterior-to-posterior
fashion. Transverse sections through pp1 verified endodermal expression
(Fig. 6F).

View larger version (77K):
[in this window]
[in a new window]
|
Fig. 6. Expression of foo at later stages of development. Detection of
foo transcripts in later stages of wild-type embryos. Expression is
consistent with both NC cell and future pharyngeal pouch endoderm expression.
(A-D) lateral view (top) and dorsal view (bottom) of foo expression
at different stages of development. (A) 10-somite stage. (B) 15-somite stage;
pharyngeal pouch endoderm of pp1 and pp2 are indicated. (C) 20-somite stage.
(D) 26 hpf; broken red lines indicate location of sections shown in F,G. (E)
Double in situ hybridization to krox20 and foo in a
10-somite stage embryo. Arrows indicate foo
expression in streaming NC cells. (F) Transverse section of a 26 hpf
foo in situ hybridized embryo through pp1. Arrow indicates endodermal
pouch expression. (G) Transverse section of a 26 hpf foo in situ
hybridized embryo through the post-otic region. Arrow indicates foo
expression.
|
|
Absent cartilages reflect lost NC-cell marker-gene expression
domains
As the cartilages are derived from NC cells, we examined the expression
patterns of early NC cell markers. dlx2 is expressed in both
migrating NC cells and post-migratory arch-associated NC cells. At 28 hpf, we
detected a substantial reduction of dlx2 expression in
foo/foo embryos in the NC cells that populate the third and fourth
arches, both of which are derived from third stream NC cells
(Fig. 7A,B). Analysis of
dlx3b expression, which is also expressed in post-migratory NC cells,
revealed reduction of expression in the third and fourth arches in
foo/foo embryos (data not shown). The endothelin 1 signaling pathway
is essential for the proper formation of ventral cartilages and at least
partly functions through the induction of the transcription factor
hand2 in ventral NC cells (Miller
et al., 2000
). The ventral expression of hand2 appeared
largely unaffected in the first and second arches consistent with the near
normal formation of ventral cartilage elements in the anterior arches, but,
mirroring the dlx2/3 defects, expression of hand2 was
markedly reduced in the third and fourth arches of foo/foo embryos
(Fig. 7C,D). Taken together,
altered expression in foo/foo embryos of these three markers indicate
a severe disruption in the proper patterning of the third and fourth
arches.

View larger version (125K):
[in this window]
[in a new window]
|
Fig. 7. foo mutants show post-migratory NC cell defects. Right panels,
foo/foo homozygote embryos; left panels are same-clutch wild-type
siblings. (A,B) dlx2 expression by in situ hybridization in wild-type
(A) and foo/foo (B) 28 hpf embryos. Arrows indicate third
stream derived third and fourth arch NC cells. Note the apparent loss of the
third and fourth arch expression domains in the mutant. (C) hand2
expression by in situ hybridization in wild-type (C) and
foo/foo (D) 28 hpf embryos. Arrows indicate third stream
derived third and fourth arch NC cells. Note the reduction and disorganization
of the third and fourth arch expression domains in the mutant. Also note the
normal ventral expression of hand2 in the first and second arches.
(E,F) gsc expression by in situ hybridization in wild-type (E) and
foo/foo (F) 34 hpf embryos. Arrows in E indicate dorsal
gsc expression domains in the first and second arch NC cells flanking
either side of pp1. Arrowhead in E indicates gsc expression in the
otic vesicle. Arrows in F indicate where gsc expression can no longer
be seen in the more dorsal region of expression; more ventral domains remain
in foo embryos. Otic vesicle expression is also absent (arrowhead in
F).
|
|
The hyomandibular region of the hyosymplectic is reduced in
foo/foo embryos. This element is derived from dorsal second arch NC
cells. Because the dlx2 and dlx3b data indicate a reduction
in dorsal second arch NC cell expression, the dorsally and ventrally second
arch restricted transcription factor gsc was examined for potential
dorsal-specific defects (Schulte-Merker et
al., 1994
). gsc expression in wild-type embryos shows
distinct dorsal NC cell expression in the first and second arches flanking
either side of pp1 as well as a distinct second arch ventral expression domain
(Miller et al., 2000
). Outside
the arches, gsc is also expressed within the developing otic vesicle.
Strikingly, the dorsal first and second arch gsc expression domains
were not detected in foo/foo embryos
(Fig. 7E,F, arrows). Expression
in the otic vesicles was likewise not detected in foo/foo embryos.
Conversely, the olfactory and ventral second arch gsc expression
domains appeared unaffected in mutants. Consistently, the homeobox
transcription factor hoxa2, which is uniformly expressed in the
second arch NC cells, also showed a dorsally restricted second arch NC cell
defect (data not shown). Thus, defects in markers for the dorsal, but not
ventral, NC cells of the first and second arches precedes the hyomandibular
defect.
foo is required for survival of certain NC cell
populations
To determine whether the loss of expression of NC cell markers and absence
of corresponding cartilages was the result of NC cell apoptosis, we performed
terminal deoxynucleotidyl transferase fluorescein-dUTP nick end labeling
(TUNEL) assays to visualize apoptotic cells in developing embryos. When
compared with wild-type embryos, foo/foo embryos display a
substantial, transient increase in apoptosis in the pharyngeal arch region
(Fig. 8A-G). The transient wave
of cell death peaks around 26 hpf at
20-fold over the intensity observed
in wild-type embryos, and is then reduced by 28 hpf
(Fig. 8H). Notably, no
increased apoptosis was observed at 22 hpf or at earlier time points during
otic development (Fig. 8H; data
not shown). Based on their sub-ectodermal location in transverse sections, at
least some of these TUNEL-positive cells appear to be post-migratory NC cells
(Fig. 8E-G, sections located as
approximately indicated in 8D). However, we cannot rule out that some of these
TUNEL-positive cells might be endodermal pouch cells.

View larger version (98K):
[in this window]
[in a new window]
|
Fig. 8. foo mutants show a loss of fgf3 expression maintenance in
the pharyngeal pouches and increased apoptosis. (A,B) TUNEL assay on a
wild-type (A) and foo/foo (B) embryos at 28 hpf, lateral
views. Arrows indicate pp1 and pp2 with increased apoptosis. (C) Dorsal view
of A; (D) dorsal view of B. Broken lines indicate approximate section
locations. (E-G) Sections of TUNEL assay stained foo/foo
embryos indicated in D. Arrows indicate TUNEL-positive cells. (H) Transient
increase in apoptosis observed in foo/foo embryos. Quantitation was
performed using NIH-Image for densitometry analysis of corresponding arch
regions between mutant and wild-type embryos. Data points represent averages
for at least three embryos. (I-P) fgf3 expression by in situ
hybridization in foo/foo (I,J,L,N,P) and wild-type (I,J,K,M,O)
siblings. (I) 16-somite stage (mutants are indistinguishable from wild type at
this stage). (J) 20-somite stage (mutants can not be distinguished from wild
type). (K) 24-somite stage embryo. fgf3 expression is maintained in
pp1 (red arrowhead) and pp2 (blue arrowhead). (L) 24-somite stage.
fgf3 expression maintenance is lost from pp1, while pp2 expression is
slightly lower than in wild type (K), but clearly visible. (M) 24 hpf embryo.
fgf3 expression is maintained in pp2 (blue arrowhead) and pp3 (black
arrowhead). (N) 24 hpf embryo. fgf3 expression maintenance is reduced
from pp2 and initiation is visible in pp3. (O) 28 hpf embryo. fgf3
expression is absent from pp1 (red arrowhead), is downregulated in pp2 (blue
arrowhead), maintained in pp3 (left black arrowhead) and initiated in pp4
(right black arrowhead). (P) 28 hpf embryo. Expression is initiated normally
in pp4 (second black arrowhead) but is prematurely lost from pp2 (blue
arrowhead) and pp3 (left black arrowhead). (Q) Flat-mounted Alcian Blue
staining of a mildly affected 4 dpf embryo injected with 5 ng of
fgf3-MO (Phillips et al.,
2001 ). Hyosymplectic (red arrow) appears relatively normal. (R) A
more strongly affected 4 dpf embryo injected with 5 ng of fgf3-MO
shows a reduction in the hyosymplectic (red arrow) consistent with the
skeletal defects observed in foo/foo embryos.
|
|
Foxi1 is required for normal pharyngeal pouch patterning
Fibroblast growth factors (Fgfs) are known to have mitogenic activity and
fgf3 is known to be expressed in the posterior half of pharyngeal
pouches (David et al., 2002
).
Therefore, we examined the dynamic expression of fgf3 in the
pharyngeal pouches. By 15 somites to at least 34 hpf of development,
fgf3 was expressed in the endoderm two pouches at a time with
downregulation in the most anterior pouch coincident with up regulation in the
next most posterior pouch on a roughly four hour cycle
(Fig. 8I,K,M,O, arrowheads;
data not shown). At 16- and 20-somite stages, expression of fgf3 was
not significantly different between wild-type and mutant animals indicating
that initiation of fgf3 expression was not compromised, and that
fgf3-positive cells are at least initially present in mutant animals
(Fig. 8I,J). However, by the
24-somite stage, foo/foo embryos showed a premature loss of
fgf3 expression from pp1, the anterior-most pharyngeal pouch
(Fig. 8L, red arrowhead).
Examination of later developmental time points also shows premature loss of
fgf3 expression from the anterior-most pouch
(Fig. 8N,P, blue then first
black arrowhead). Thus, although initiation of fgf3 pouch expression
is always observed, the maintenance of fgf3 pouch expression appears
compromised. Expression of fgf3 in other regions of the embryo, such
as the isthmic region, was unaffected, which indicates the specificity of this
defect.
As morpholinos that inhibit fgf3 are known to cause posterior
pharyngeal arch defects similar to those observed in foo/foo embryos,
we analyzed fgf3 morpholino injected animals for hyomandibular
defects (David et al., 2002
).
Consistent with personal communications (L. Maves and C. B. Kimmel,
unpublished) we observed not only the posterior gill arch defects but also a
reduction of the hyosymplectic (Fig.
8Q,R, arrows). Out of 39 fgf3 morpholino-injected animals
selected at 30 hpf for a reduced otic vesicle phenotype and raised to 4 days
of age, 10 showed all cartilages severely reduced (not shown), 16 displayed
the strong phenotype (Fig. 8R) and 13 showed the mild phenotype (Fig.
8Q). We also analyzed fgf3 morpholino injected animals
for apoptosis by TUNEL assay and observed substantially increased levels of
apoptosis in morphant animals compared with controls. However, extensive cell
death in fgf3 morpholino injected animals made conclusive
interpretations of the TUNEL assays regarding specific NC cell apoptosis
effects difficult (data not shown).
To determine the extent of the pharyngeal pouch patterning defect, we
examined the staining pattern of zn-8, a monoclonal antibody that recognizes
the pouch ectoderm, and we examined the expression pattern of the
transcription factor nkx2.3, a later marker for posterior pouch
endoderm. At 34 hpf, the zn-8 antibody effectively labeled pp1-pp4 in the
wild-type animal but foo/foo embryos displayed significant reductions
in pp2-pp4 (Fig. 9A,B).
Although slightly reduced, pp1 was labeled by zn-8 in foo/foo embryos
indicating that complete patterning of pp1 may depend upon additional factors,
reflecting the higher complexity of the cartilage structures developing
adjacent to this pouch. Consistent with this interpretation, ephrin
B2a expression in pp1 was unaffected in foo/foo embryos (data
not shown). The disrupted expression of nkx2.3 from pp2-pp5 provides
further indication that posterior pouch patterning requires foo
(Fig. 9C,D).

View larger version (120K):
[in this window]
[in a new window]
|
Fig. 9. The foo mutation affects pouch formation. Right panels,
foo/foo homozygote embryos; left panels, same-clutch wild-type
siblings. (A) zn-8 antibody staining of a wild-type embryo at 34 hpf.
Pharyngeal pouches (pp1-pp4) are indicated by arrowheads as in
Fig. 8. (B) zn-8 antibody
staining of a 34 hpf foo/foo embryo. The posterior pouches pp2-4 are
substantially reduced, whereas pp1 is only mildly affected. (C)
nkx2.3 expression by in situ hybridization of a 30 hpf wild-type
embryo. (D) nkx2.3 expression in a 30 hpf foo/foo embryo.
Most of the nkx2.3 expression is absent or disorganized. (E)
pax8 expression in a 21-somite wild-type embryo with pp2 indicated as
in A. (F) pax8 expression in a 21-somite foo/foo embryo.
Expression of pax8 in pp2 is absent and the otic vesicle is
substantially reduced.
|
|
Conserved foo/pax8 signaling in the pharyngeal pouches
Expression of pax8 has been reported in the hyoid arch in mice,
but has not been reported in the zebrafish hyoid arch
(Pfeffer et al., 1998
). To
determine whether the foo-pax8 pathway is present in the pharyngeal
pouches we examined pax8 expression in foo/foo embryos.
Although we were unable to detect expression of pax8 in pp1 or pp2 at
the 15-somite stage (data not shown), there was clear expression of
pax8 in the posterior part of pp2 at the 21-somite stage and that
expression domain was absent in foo/foo embryos
(Fig. 9E,F, blue arrowhead).
Likewise, at 30 hpf, pax8 expression was observed in more posterior
pouches of normal sibling embryos but absent in foo/foo embryos (data
not shown). This apparent AP progression of pax8 pouch expression was
reminiscent of both the foo and fgf3 expression profiles.
Interestingly, at 34 hpf, pax8 expression in the thyroid precursor
cells was detected in foo/foo embryos indicating that not all
pharyngeal endoderm expression of pax8 is dependent on foo
activity (data not shown).
 |
DISCUSSION
|
|---|
Role of foxi one in otic placode induction and
organization
We have demonstrated that embryos mutated in foo show a severe
defect in the formation of the otic placode. foo gene expression
begins early with mRNA detectable by the sphere stage in a restricted ventral
region near the animal pole. By fate mapping, this region corresponds to
presumptive placodal tissue (Kozlowski et
al., 1997
; Woo et al.,
1995
). By the tail bud stage, foo expression was
localized in two distinct bilateral regions that mark the future otic
placodes. Prior to this study, pax8 was the earliest known marker of
the otic placodes. Remarkably, not only does foo expression in
presumptive placodal tissue precede pax8 expression, but
foo/foo embryos also show a complete loss of pax8 expression
in the otic placode as well as reduction and disorganization of later otic
placode markers. This places pax8 downstream of foo, which
makes it the earliest known marker of otic placode development and gives
foo a demonstrated role in the induction of a specific otic vesicle
marker.
At tail bud stage, dlx3b is normally expressed in all placodal
tissue forming a discrete lateral band of expression that encircles the
anterior neural plate with higher expression over the future otic placode
(Akimenko et al., 1994
). By the
10-somite stage, dlx3b is normally strongly expressed in the otic
placode, although its expression is no longer detected laterally between the
otic placode and the anteriormost domain. Although 10 somites stage
foo/foo embryos show the reduced otic placode expression of
dlx3b, the mutant embryos apparently also retain from the tail bud
stage some of the lateral band of dlx3b expression surrounding the
anterior neural plate (see Fig.
3), suggesting that foo may function in restricting or
maintaining the coherence of the expression domains of placodal markers. This
failure to tightly restrict the expression domains of otic placode markers
such as dlx3b and pax2a might explain why foo/foo
embryos often display split and/or duplicated otic vesicles at pharyngula and
later stages. Thus, this Foxi1-dependent pathway has an essential function for
the developing otic placode but not a significant role in initial
induction.
Three recent papers show that induction of the otic placode requires both
fgf3 and fgf8 (Leger and
Brand, 2002
; Maroon et al.,
2002
; Phillips et al.,
2001
). The combined data from the three papers suggest that
pax8 expression is induced by fgf3 signaling, but the amount
of signal required to induce pax8 is much lower than other otic
placode markers.
Removing fgf3/8 signals completely eliminates otic induction, but
foo/foo embryos still show an induction of several markers. Although
other models are possible, the simplest model places foo activity
between fgf3/8 and pax8 in the induction. Because of the
observed phenotype, we propose that fgf3/8 signaling to the otic
placode induces parallel pathways. The Foxi1-independent pathway begins very
early and would be responsible for the initial induction and expansion of the
otic placode. As foo/foo embryos completely lacked pax8
expression in the otic placode, yet were still able to induce placodal
structures that ultimately formed an ear, our data suggests that in zebrafish,
pax8 and foo function are not required for otic placode
induction. There is early pax8 expression in mouse otic placodes
(Pfeffer et al., 1998
), and a
mouse line with a targeted deletion of pax8 has been made, but there
no data have yet been reported regarding ear defects in these mice
(Mansouri et al., 1998
).
The second, Foxi1-dependent pathway has at least the one downstream effect:
that of inducing pax8 expression. Based on data obtained by treating
embryos with the Fgf receptor inhibitor SU5402
(Leger and Brand, 2002
),
initiation of this pax8 induction would take place sometime after 70%
epiboly, as SU5402 added at 70% epiboly can block pax8 expression.
The role of the earlier initiating Fgf signal would be to provide an
activating signal for foo-expressing cells to induce pax8
and perhaps other unidentified downstream genes. It is also important to note
that foo expression is likely to be independent of fgf3/8
signaling even though pax8 expression is not.
We suggest that foo/foo mutant embryos demonstrate an uncoupling
of otic placode induction from its subsequent morphogenesis
(Fig. 10). This organizational
or `integrity-maintenance' activity would hold the placode together with the
predicted effect of this model being similar to what we actually see in the
foo mutants, that is, smaller dissociated placodal precursors.
Because the regions of pax2a and dlx3b appear to be somewhat
reduced, we also propose that foo-expressing cells generate positive
feedback to the Fgf signals (Fig.
10). This is an idea we will return to more strongly in the
discussion of the role of foo in the developing jaw.

View larger version (45K):
[in this window]
[in a new window]
|
Fig. 10. A model that places foo in pathways for ear and jaw development.
foo expression is independent of Fgf signaling, but it allows cells
to respond to Fgf signaling with a specific genetic program, which includes
the induction of pax8. Feedback mechanisms for the maintenance of Fgf
expression are inferred from the data. Phenotypic effects observed in the
embryos when foo function is eliminated are listed below.
|
|
Roles of foo in the developing jaw
We have demonstrated that foo/foo embryos display severe cartilage
defects and shown how analysis of mutants provides mechanistic insight into
how foo activity can differentially affect dorsal and ventral
cartilage shapes through affecting the maintenance of fgf3
expression. By the 10-somite stage, foo/foo embryos displayed a
disorganized third stream of NC cells that invaded the otic placode region. As
the otic placode is thought to serve as an inhibitory guidance cue
(Sechrist et al., 1993
;
Smith et al., 1997
), the
observed third stream migration defect is perhaps secondary to the previously
described otic placode defects. Without the maintained integrity of tight
cell-cell interactions, the otic placode may no longer be capable of
deflecting the ventral movement of third stream NC cells. The extent of the
third stream migration defect appeared limited to invasion of otic placode
territory because no krox20-expressing third stream cells were
detected in post-migratory second stream territory
(Fig. 4D, dorsal view, the area
lateral to r2-r4). It is important to emphasize that a significant fraction of
the third stream NC cells do not undergo apoptosis because, although reduced,
posterior cartilages are readily detected in foo/foo embryos.
Alternatively, these migration defects could be intrinsic to NC cells lacking
Foo activity, a question that will require cell transplantations and cell
autonomy studies for a clear answer.
Because first and second stream NC cell migration appeared normal in
foo/foo embryos, the hyomandibular defects probably arose from
defects at later stages of jaw development. By the 15-somite stage,
foo expression was readily observed in the endoderm of the pharyngeal
pouches. At around 20 somites stage, foo/foo embryos showed a loss of
pax8 expression from the pouches followed shortly at the 24 somites
stage by a premature loss of fgf3 expression. The combined action of
strong Fgf signaling and foo activity would prefigure the pouch
pax8 expression domains, as fgf3 is expressed in only the
posterior half of pp2 as is pax8. Consistent with this observation,
pax8 expression in the otic placode is strongly dependent on both Fgf
signaling and foo activity. Thus, in both the ear and the jaw, we
propose that foo expression is responsible for the modification of
downstream cellular responses to Fgf signaling leading to the induction of
pax8 expression.
Interestingly, loss of pax8 expression in foo/foo embryos
precedes the loss of fgf3 maintenance in pp2. It is possible that
foo and pax8 function to maintain pouch endoderm integrity
of markers such as nkx2.3 in a manner analogous to otic placode
integrity (Fig. 10). A future
direction will be to determine whether feedback maintenance of Fgf signaling
depends on pax8 function. fgf3 is expressed in the
pharyngeal pouches in a roughly AP progressive wave. From 15 somites until
around 34 hpf, fgf3 expression is maintained in two pouches at a time
with attenuation of the anterior-most pouch coinciding with the up regulation
of the next posterior-most pouch. In foo/foo embryos, initial
induction of fgf3 expression in any particular pharyngeal pouch
appeared to be only modestly affected. However, the onset of signal
attenuation appeared prematurely, which is consistent with a role for
foo in the maintenance of fgf3 pouch expression. Thus,
foo expression is not required for initial induction of fgf3
in pouches but instead is part of a transient positive feedback mechanism that
maintains fgf3 signaling. It is possible that this maintenance is
either at the transcriptional level causing cells to continue to express fgf3,
or at the survival level, providing positive feedback signals that prevent
fgf3 cells from apoptosis. Further experiments will be required to determine
which of these is true.
At 26 hpf, a 20-fold increase in NC cell apoptosis was observed in the
arches. This transient wave of cell death is probably a direct result of the
lost fgf3 maintenance because both cas mutants, which lack
all endoderm (including fgf3 pouch expression), and SU5402-treated
embryos, in which Fgf receptor signaling is blocked, display extensive NC cell
apoptosis. The apoptosis in foo mutant embryos is not as severe as
these other cases because some residual fgf3 signaling is still
present. Consistently, fgf3-MO animals appear to display jaw defects
that are very similar to and slightly more severe than those observed in
foo/foo embryos (Figs
5,
8). Therefore, the failure to
maintain fgf3 expression in foo/foo embryos is what causes
the widespread but transient NC cell apoptosis, causing reductions in the
dorsal structures of both the mandibular and hyoid arches, and variable
reductions in the more posterior branchial arches.
The apoptotic death of NC cells probably explains the later absence of the
dorsal first and second arch gsc expression domains as well as the
loss of posterior arch defects in dlx2, dlx3b and hand2
expression. Notably, dlx2 expression is likewise lost in posterior
arches of cas/cas and fgf3-MO animals
(David et al., 2002
). The
unperturbed patterning of the ventral NC cells is indicated by the normal
expression of dlx2, dlx3b, hand2, gsc and hoxa2 gene
expression in ventral NC cells as well as the equivalence in size of Meckel's
cartilage between foo/foo and wild-type embryos. Interestingly,
ventral NC cells of both the mandibular and hyoid arches do not require an
fgf3-mediated signal for survival and/or proliferation, yet are
absent in SU5402-treated embryos, implicating an essential role for a
different as yet unidentified Fgf ligand. Similarly, it is worth noting that
in spite of the fgf3 maintenance defects, which extend into the more
posterior pouches such as pp3 to pp5, that the most posterior fifth to seventh
arches appear unaffected in foo/foo embryos. A possible explanation
for the normal patterning of these posterior arches is an undetermined Fgf
signal that can compensate for the loss of fgf3. Consistent with this
explanation, fgf3-MO animals often show normal cartilages from the
fifth to seventh arches that are missing in SU5402-treated embryos
(David et al., 2002
).
The complexity of the pharyngeal endoderm patterning pathways is further
highlighted by the dual observations of lost pp2 pax8 expression
around the 20 somites stage (Fig.
9E,F) and retained thyroid follicular precursor cell pax8
expression in 34 hpf foo/foo embryos (data not shown). As both
tissues are pharyngeal endoderm derived, alternate pathways must exist for
inducing pax8 expression not only in tissues such as the eyes, MHB
and pronephric ducts but also in more medial regions of the pharyngeal
endoderm. It is possible or likely that foo expression in the
pharyngeal pouches has other important functions that will require further
experimentation to establish.
There are several noteworthy implications for the observed failure to
maintain fgf3 expression on possible mechanisms of establishing DV or
AP polarity within an arch. First, it suggests that the relative size of a
particular cartilage element can be directly influenced by the duration of a
particular Fgf signal; the shorter the Fgf pulse, the fewer cells
survive/proliferate and the smaller the structure. It is therefore possible
that either a different Fgf signal might mediate survival of a different
population of cartilage precursors or that a short but intense pulse of an Fgf
signal could facilitate survival near the point source but with little effect
at a distance. Second, it suggests that regional functionality of Fgf
signaling could direct cartilage shape. The patterned induction of a variety
of Fgf antagonist molecules, such as sef or sprouty family
members, could direct cartilage shape by eliminating specific Fgf signals from
specific NC cells. In support of this, sprouty4 has been shown to be
expressed in the pouches (Furthauer et
al., 2001
). The combined action of multiple patterned Fgf agonists
and multiple antagonists could therefore generate fairly complex DV, AP and ML
matrixes of survival, proliferation and death cues. Furthermore, we suggest
small changes in this complex interplay of signals could be one of the
mechanisms for the evolutionary adaptation of jaw structures.
Evolutionary implications
Our results show that in zebrafish, foo is a very early regulator
of both ear and jaw development and is upstream of pax8 induction in
both structures. pax2, pax5 and pax8 are believed to have
arisen from a single ancestral pax2/5/8 gene
(Pfeffer et al., 1998
). Two
recent publications have identified a single pax2/5/8 gene in
ascidians and amphioxus that is expressed in the region of the primordial
pharynx, a region analogous to the pharyngeal arches of vertebrates
(Kozmik et al., 1999
;
Wada et al., 1998
). Given the
observed commonality of gene expression between the otic vesicle and the
arches, we argue for a synthesis between two interpretations of the
pax2/5/8 expression data in these primitive organisms
(Kozmik et al., 1999
;
Wada et al., 1998
). The
ascidian cupulae could be considered gill slits that developed a placode-like
function that differentiates into the ciliated primary sensory cells involved
in feeding. The functional and spatial separation of these sensory regions
away from the underlying arches as chordates evolved might explain why certain
molecular markers that characterized the original gill slit ectoderm are
maintained in vertebrate placode-derived structures. Because at least one
vertebrate, the zebrafish, co-expresses foo and pax8 in the
otic placode ectoderm and also in the pouch endoderm, one might imagine that
the primordial gill slit would express foo and pax8 in both
ectoderm and endoderm layers. The ability to perform gene knockdown studies in
ascidians will allow for direct testing of conservation of gene regulatory
networks (Heasman, 2002
;
Satou et al., 2001
).
Even if the jaw and ear do not have a common origin, sharing gene
regulatory networks helps explain how, across the water-to-land transition,
the hyomandibular might transform into the stapes
(Webster et al., 1992
). If the
hyoid NC cells lost purpose in the jaw but were still responsive to many of
the same signaling molecules, such as Fgfs, then it is possible that the
presumptive hyoid NC cells began responding to signals relating to the otic
placode instead of the forming jaw. Without the similarities in gene
expression, the mechanism for this jaw to middle ear NC cell shift would have
to have happened in a more random and uncontrolled way. To address this issue
directly is challenging; however, a simple, testable prediction of this
jaw-ear crossover theory is that Foxi1/ mice
should display middle ear bone defects, perhaps specific to the stapes.
 |
ACKNOWLEDGMENTS
|
|---|
We thank Kirsten Sadler for critical reading of the manuscript; J. G.
Crump, L. Maves and C. B. Kimmel for helpful discussions; B. Riley for
fgf3-MO; and S. Farrington and the technical staff of the Hopkins laboratory
for support. We also thank the Developmental Studies Hybridoma Bank
(maintained by the Department of Biological Sciences, The University of Iowa)
for the zn-8 antibody, and A. M. Caron of the MIT CCR Core Histology Facility
for technical assistance on sections. R.M.N. was supported by a post-doctoral
fellowship from the NIH. This work was also supported by grants from Amgen and
NIH, and the intramural program of the NHGRI.
 |
REFERENCES
|
|---|
Akimenko, M. A., Ekker, M., Wegner, J., Lin, W. and Westerfield,
M. (1994). Combinatorial expression of three zebrafish genes
related to distal-less: part of a homeobox gene code for the head.
J. Neurosci. 14,3475
-3486.[Abstract]
Alexander, J., Rothenberg, M., Henry, G. L. and Stainier, D.
Y. (1999). casanova plays an early and essential role in
endoderm formation in zebrafish. Dev. Biol.
215,343
-357.[CrossRef][Medline]
Amsterdam, A., Burgess, S., Golling, G., Chen, W., Sun, Z.,
Townsend, K., Farrington, S., Haldi, M. and Hopkins, N.
(1999). A large-scale insertional mutagenesis screen in
zebrafish. Genes Dev.
13,2713
-2724.[Abstract/Free Full Text]
Angelo, S., Lohr, J., Lee, K. H., Ticho, B. S., Breitbart, R.
E., Hill, S., Yost, H. J. and Srivastava, D. (2000).
Conservation of sequence and expression of Xenopus and zebrafish dHAND during
cardiac, branchial arch and lateral mesoderm development. Mech.
Dev. 95,231
-237.[CrossRef][Medline]
Avraham, K. B., Fletcher, C., Overdier, D. G., Clevidence, D.
E., Lai, E., Costa, R. H., Jenkins, N. A. and Copeland, N. G.
(1995). Murine chromosomal location of eight members of the
hepatocyte nuclear factor 3/fork head winged helix family of transcription
factors. Genomics 25,388
-393.[CrossRef][Medline]
Bever, M. M. and Fekete, D. M. (2002). Atlas of
the developing inner ear in zebrafish. Dev. Dyn.
223,536
-543.[CrossRef][Medline]
Chen, W., Burgess, S., Golling, G., Amsterdam, A. and Hopkins,
N. (2002). High-throughput selection of retrovirus producer
cell lines leads to markedly improved efficiency of germ line-transmissible
insertions in zebra fish. J. Virol.
76,2192
-2198.[Abstract/Free Full Text]
Clevidence, D. E., Overdier, D. G., Tao, W., Qian, X., Pani, L.,
Lai, E. and Costa, R. H. (1993). Identification of
nine tissue-specific transcription factors of the hepatocyte nuclear factor
3/forkhead DNA-binding-domain family. Proc. Natl. Acad. Sci.
USA 90,3948
-3952.[Abstract/Free Full Text]
Clouthier, D. E., Hosoda, K., Richardson, J. A., Williams, S.
C., Yanagisawa, H., Kuwaki, T., Kumada, M., Hammer, R. E. and
Yanagisawa, M. (1998). Cranial and cardiac neural crest
defects in endothelin-A receptor-deficient mice.
Development 125,813
-824.[Abstract]
David, N. B., Saint-Etienne, L., Tsang, M., Schilling, T. F. and
Rosa, F. M. (2002). Requirement for endoderm and FGF3 in
ventral head skeleton formation. Development
129,4457
-4468.[Abstract/Free Full Text]
Ekker, S. C. (2000). Morphants: a new
systematic vertebrate functional genomics approach.
Yeast 17,302
-306.[CrossRef][Medline]
Furthauer, M., Reifers, F., Brand, M., Thisse, B. and Thisse,
C. (2001). sprouty4 acts in vivo as a feedback-induced
antagonist of FGF signaling in zebrafish. Development
128,2175
-2186.
Golling, G., Amsterdam, A., Sun, Z., Antonelli, M., Maldonado,
E., Chen, W., Burgess, S., Haldi, M., Artzt, K., Farrington, S. et
al. (2002). Insertional mutagenesis in zebrafish rapidly
identifies genes essential for early vertebrate development. Nat.
Genet. 31,135
-140.[CrossRef][Medline]
Haddon, C. and Lewis, J. (1996). Early ear
development in the embryo of the zebrafish, Danio rerio. J. Comp.
Neurol. 365,113
-128.[CrossRef][Medline]
Hanneman, E., Trevarrow, B., Metcalfe, W. K., Kimmel, C. B.
and Westerfield, M. (1988). Segmental pattern of
development of the hindbrain and spinal cord of the zebrafish embryo.
Development 103,49
-58.[Abstract]
Hauptmann, G. and Gerster, T. (1995). Pou-2
a zebrafish gene active during cleavage stages and in the early
hindbrain. Mech. Dev.
51,127
-138.[CrossRef][Medline]
Heasman, J. (2002). Morpholino oligos: making
sense of antisense? Dev. Biol.
243,209
-214.[CrossRef][Medline]
Hulander, M., Wurst, W., Carlsson, P. and Enerback, S.
(1998). The winged helix transcription factor Fkh10 is required
for normal development of the inner ear. Nat. Genet.
20,374
-376.[CrossRef][Medline]
Kimmel, C. B., Ballard, W. W., Kimmel, S. R., Ullmann, B. and
Schilling, T. F. (1995). Stages of embryonic
development of the zebrafish. Dev. Dyn.
203,253
-310.[Medline]
Kimmel, C. B., Miller, C. T. and Moens, C. B.
(2001). Specification and morphogenesis of the zebrafish larval
head skeleton. Dev. Biol.
233,239
-257.[CrossRef][Medline]
Kozlowski, D. J., Murakami, T., Ho, R. K. and Weinberg, E.
S. (1997). Regional cell movement and tissue patterning in
the zebrafish embryo revealed by fate mapping with caged fluorescein.
Biochem. Cell Biol. 75,551
-562.[CrossRef][Medline]
Kozmik, Z., Holland, N. D., Kalousova, A., Paces, J., Schubert,
M. and Holland, L. Z. (1999). Characterization of an
amphioxus paired box gene, AmphiPax2/5/8: developmental expression patterns in
optic support cells, nephridium, thyroid-like structures and pharyngeal gill
slits, but not in the midbrain-hindbrain boundary region.
Development 126,1295
-1304.[Abstract]
Krauss, S., Johansen, T., Korzh, V. and Fjose, A.
(1991). Expression of the zebrafish paired box gene pax[zf-b]
during early neurogenesis. Development
113,1193
-1206.[Abstract]
Kurihara, Y., Kurihara, H., Suzuki, H., Kodama, T., Maemura, K.,
Nagai, R., Oda, H., Kuwaki, T., Cao, W. H., Kamada, N. et al.
(1994). Elevated blood pressure and craniofacial abnormalities in
mice deficient in endothelin-1. Nature
368,703
-710.[CrossRef][Medline]
Larsson, C., Hellqvist, M., Pierrou, S., White, I., Enerback, S.
and Carlsson, P. (1995). Chromosomal localization of
six human forkhead genes, freac-1 (FKHL5), -3 (FKHL7), -4 (FKHL8), -5 (FKHL9),
-6 (FKHL10), and -8 (FKHL12). Genomics
30,464
-469.[CrossRef][Medline]
Le Douarin, N. M. and Ziller, C. (1993).
Plasticity in neural crest cell differentiation. Curr. Opin. Cell
Biol. 5,1036
-1043.[CrossRef][Medline]
Lee, K. H., Xu, Q. and Breitbart, R. E. (1996).
A new tinman-related gene, nkx2.7, anticipates the expression of nkx2.5 and
nkx2.3 in zebrafish heart and pharyngeal endoderm. Dev.
Biol. 180,722
-731.[CrossRef][Medline]
Leger, S. and Brand, M. (2002). Fgf8 and Fgf3
are required for zebrafish ear placode induction, maintenance and inner ear
patterning. Mech. Dev.
119, 91.