First published online 10 November 2004
doi: 10.1242/dev.01526
Development 131, 6053-6069 (2004)
Published by The Company of Biologists 2004
Pigment pattern evolution by differential deployment of neural crest and post-embryonic melanophore lineages in Danio fishes
Ian K. Quigley,
Jessica M. Turner,
Richard J. Nuckels,
Joan L. Manuel,
Erine H. Budi,
Erin L. MacDonald and
David M. Parichy*
Section of Integrative Biology, Section of Molecular, Cell and
Developmental Biology, Institute for Cellular and Molecular Biology,
University of Texas at Austin, 1 University Station C0930, Austin, TX 78712,
USA
*
Author for correspondence (e-mail:
dparichy{at}mail.utexas.edu)
Accepted 11 October 2004
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SUMMARY
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Latent precursors or stem cells of neural crest origin are present in a
variety of post-embryonic tissues. Although these cells are of biomedical
interest for roles in human health and disease, their potential evolutionary
significance has been underappreciated. As a first step towards elucidating
the contributions of such cells to the evolution of vertebrate form, we
investigated the relative roles of neural crest cells and post-embryonic
latent precursors during the evolutionary diversification of adult pigment
patterns in Danio fishes. These pigment patterns result from
the numbers and arrangements of embryonic melanophores that are derived from
embryonic neural crest cells, as well as from post-embryonic metamorphic
melanophores that are derived from latent precursors of presumptive neural
crest origin. In the zebrafish D. rerio, a pattern of melanophore
stripes arises during the larval-to-adult transformation by the recruitment of
metamorphic melanophores from latent precursors. Using a comparative approach
in the context of new phylogenetic data, we show that adult pigment patterns
in five additional species also arise from metamorphic melanophores,
identifying this as an ancestral mode of adult pigment pattern development. By
contrast, superficially similar adult stripes of D. nigrofasciatus (a
sister species to D. rerio) arise by the reorganization of
melanophores that differentiated at embryonic stages, with a diminished
contribution from metamorphic melanophores. Genetic mosaic and molecular
marker analyses reveal evolutionary changes that are extrinsic to D.
nigrofasciatus melanophore lineages, including a dramatic reduction of
metamorphic melanophore precursors. Finally, interspecific complementation
tests identify a candidate genetic pathway for contributing to the
evolutionary reduction in metamorphic melanophores and the increased
contribution of early larval melanophores to D. nigrofasciatus adult
pigment pattern development. These results demonstrate an important role for
latent precursors in the diversification of pigment patterns across danios.
More generally, differences in the deployment of post-embryonic neural
crest-derived stem cells or their specified progeny may contribute
substantially to the evolutionary diversification of adult form in
vertebrates, particularly in species that undergo a metamorphosis.
Key words: Zebrafish, Pigment pattern, Evolution, Morphogenesis, Neural crest, Stem cell, Phylogeny
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Introduction
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Neural crest cells give rise to many of the shared, derived traits of
vertebrates (Gans and Northcutt,
1983
; Hall, 1999
).
These cells arise along the dorsal neural tube during neurulation and then
disperse widely throughout the embryo
(Knecht and Bronner-Fraser,
2002
; Halloran and Berndt,
2003
). Among the cells and tissues derived from this transient,
migratory population are pigment cells, glia and neurons of the peripheral
nervous system, endocardial cushion cells, chromaffin cells of the adrenal
gland, smooth muscle, and bone and cartilage of the craniofacial skeleton
(Hörstadius, 1950
;
Le Douarin, 1999
). Not
surprisingly, in light of their many derivatives, neural crest cells are
associated with a wide range of inherited and acquired disorders ranging from
melanoma to neuroblastoma, Hirschsprung disease to Waardenburg syndrome, and
Treacher Collins syndrome to craniofacial dysmorphogenesis following fetal
ethanol exposure (Matthay,
1997
; Amiel and Lyonnet,
2001
; Ahlgren et al.,
2002
; Chin, 2003
;
Widlund and Fisher, 2003
;
Farlie et al., 2004
). Changes
in the patterning of neural crest cells and their derivatives are similarly
thought to underlie much of vertebrate diversity, from variation in pigment
pattern to variation in jaw morphology
(Kelsh, 2004
;
Kulesa et al., 2004
).
Given the biomedical and evolutionary significance of neural crest cells
and their derivatives, it is of paramount importance to identify the
mechanisms by which these cells are patterned to generate the particular forms
expressed by juveniles and adults. Most studies have focused on the early
patterning of neural crest cells during embryogenesis. Yet, recent studies
have demonstrated post-embryonic neural crest-derived stem cells in peripheral
nerves, gut and skin (Morrison et al.,
1999
; Bixby et al.,
2002
; Kruger et al.,
2002
; Nishimura et al.,
2002
; Iwashita et al.,
2003
; Sieber-Blum and Grim,
2004
; Sieber-Blum et al.,
2004
; Joseph et al.,
2004
). These findings suggest that the development and maintenance
of adult traits, as well as the evolution of these traits, may depend on
contributions from latent stem cells in addition to direct contributions from
neural crest cells at embryonic stages.
A useful system for studying the development and evolution of neural
crest-derived traits is the pigment pattern of teleost fishes
(Quigley and Parichy, 2002
;
Parichy, 2003
;
Kelsh, 2004
). In the zebrafish
Danio rerio, an early larval pigment pattern develops during
embryogenesis as neural crest cells differentiate into early larval
melanophores and other pigment cell classes. This pattern is largely completed
by 3 days post-fertilization (dpf), and includes melanophore stripes along the
dorsal and ventral edges of the myotomes, and along the horizontal myoseptum
(Milos and Dingle, 1978a
;
Kelsh et al., 2000
). The early
larval pigment pattern remains essentially unchanged for about two weeks,
until the onset of pigment pattern metamorphosis. At this time, new
melanophores appear over the flank in regions not previously occupied by these
cells, and during the following two weeks, the pigment pattern is transformed
into that of the adult (Fig. 1)
(Kirschbaum, 1975
;
Johnson et al., 1995
;
Parichy et al., 2000b
).
Genetic and cellular analyses demonstrate that new melanophores arising at
metamorphosis differentiate from latent precursors or stem cells of
presumptive neural crest origin (Johnson
et al., 1995
; Parichy and
Turner, 2003b
); such melanophores also play a crucial role in
pigment pattern regeneration (Goodrich and
Nichols, 1931
; Rawls and
Johnson, 2000
; Rawls and
Johnson, 2001
). Although previous studies provide compelling
evidence that metamorphic and regenerative melanophores are derived from
post-embryonic latent precursors, specific markers for these cells have not
been demonstrated, and their locations, potencies and developmental
requirements remain largely unknown. Given these caveats, we refer to these
post-embryonic melanophores simply as `metamorphic' melanophores.

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Fig. 1. Diverse pigment patterns of Danio fishes and their relatives.
D. rerio, D. nigrofasciatus and D. kyathit all exhibit
well-defined horizontal stripes of melanophores, although D. kyathit
adults develop breaks and irregularities in the stripes both anteriorly
(shown) and posteriorly. D. kerri exhibits a few broad and relatively
diffuse melanophore stripes. D. albolineatus adults lack horizontal
stripes and melanophores are evenly distributed, although larvae exhibit a
transient pattern of stripes posteriorly. D. choprae have vertical
bars of melanophores as adults and transient horizontal stripes at earlier
stages. Devario (formerly Danio) shanensis adults
have vertical bars of melanophores anteriorly, with horizontal stripes
posteriorly. Tanichthys albonubes exhibit a narrow horizontal
melanophore stripe with a broader pattern of evenly dispersed melanophores.
Yellow coloration in fish derives from neural crest-derived xanthophores,
whereas red pigment in some species derives from neural crest-derived
erythrophores. Adult fish are 25-30 mm standard length.
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The diversity of pigment patterns in species closely related to D.
rerio allows the use of comparative and experimental approaches to
understand pigment pattern development and evolution
(Parichy and Johnson, 2001
;
Quigley and Parichy, 2002
;
Parichy, 2003
). Besides
horizontal stripes of varying width and number, these species exhibit vertical
bars and uniform pigment patterns in which melanophores are dispersed evenly
over the flank (Fig. 1). This
interspecific variation provides an opportunity to dissect the genetic and
cellular mechanisms underlying naturally occurring phenotypic variation in an
adult trait of neural crest origin.
In this study, we ask whether adult melanophore stripes develop similarly
across species, and in particular, whether the relative roles of neural
crest-derived early larval melanophores and metamorphic melanophores have been
maintained during evolution. To address this question, we first examine D.
nigrofasciatus (Fig. 1), a
species having fewer melanophores and stripes than D. rerio, but in
which stripes that do develop are similar to those of D. rerio.
Whereas stripes in D. rerio arise almost entirely from metamorphic
melanophores, we show that stripes in D. nigrofasciatus arise from
fewer metamorphic melanophores and an increased number of neural crest-derived
early larval melanophores that persist into the adult. This interspecific
variation led us to test the relative roles of these melanophore lineages
during pigment pattern development in several additional species. These
analyses demonstrate that a primary role for metamorphic melanophores in adult
pigment pattern formation is likely to be ancestral for Danio, and
that D. nigrofasciatus exhibits a unique, derived reduction in these
cells, with a corresponding increased contribution of early larval
melanophores to the adult pigment pattern. We further demonstrate that
evolutionary changes within D. nigrofasciatus are extrinsic
(non-autonomous) to the melanophore lineages, and we identify a candidate
genetic pathway for mediating this change. These analyses highlight the
potential for studies of D. rerio and its relatives to reveal basic
mechanisms of post-embryonic neural crest development.
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Materials and methods
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Fish stocks, crosses and genotyping
Fish were reared at 28.5°C (14 hours light: 10 hours dark). Wild-type
D. rerio were the inbred mapping strain ABut, or an
outbred wild-type stock representing mixed ABut, wikut,
commercially derived `ekkwill', and other backgrounds. No differences in
development were observed between wild-type D. rerio strains. D.
nigrofasciatus, D. choprae, Devario shanensis and Tanichthys
albonubes were derived from stocks purchased originally from a commercial
pet supplier (Transship Discounts, Jamaica, NY). D. albolineatus and
D. kerri were derived from stocks originally provided by M. McClure
(Cornell University). D. `hikari' (used in phylogeny reconstruction)
was obtained commercially and resembles D. kerri but has not been
described formally. D. kyathit also was obtained commercially, but
has more complete stripes than the type described
(Fang, 1998
), and may
represent a variant or subspecies; for ease of presentation we refer to these
fish simply as `D. kyathit' in the text, but to acknowledge the
uncertainty of their precise taxonomic affinity, we refer to the fish as
`D. aff. kyathit' in the phylogram. D. rerio
mutants have already been described: albinob4
(Kelsh et al., 2000
),
sox10 (colourless)
(Dutton et al., 2001
),
endothelin receptor b1 (ednrb1, roseb140)
(Parichy et al., 2000a
),
tfap2a (lockjawts213)
(Knight et al., 2003
;
Knight et al., 2004
),
mitfa (nacrew2)
(Lister et al., 1999
), and
pumaj115e1 (Parichy
and Turner, 2003b
; Parichy et
al., 2003
). Additional D. rerio mutants were derived from
on-going mutagenesis screens (D.M.P., E.H.B. and E.L.M., unpublished).
Interspecific complementation tests were performed as previously described
(Parichy and Johnson, 2001
) by
in vitro fertilization. Because of difficulties obtaining fertilizable eggs
from heterospecific danios, most complementation tests were performed using
D. rerio females and heterospecific males. When the identities or map
positions of D. rerio mutant loci were known, heterozygotes were used
for generating interspecific hybrids, to randomize effects across unlinked
loci, and progeny were genotyped for the presence or absence of the mutant
allele by PCR (primers and diagnostic single nucleotide polymorphisms
available on request). Finally, puma mutant D. rerio are
temperature-sensitive, with growth rate-dependent pigment pattern defects at
25°C, moderate pigment pattern defects at 28.5°C, and more severe
defects at 33°C (Parichy et al.,
2003
); tester puma hybrids were reared at the
intermediate temperature of 28.5°C to avoid mortality owing to stresses at
the higher temperatures.
Nomenclature for pigment pattern elements at larval and adult stages
Previous studies defined pigment pattern elements in D. rerio
(Parichy and Johnson, 2001
;
Parichy and Turner, 2003b
),
including: early larval dorsal, lateral and ventral melanophore
stripes (ELD, ELL, ELV); adult first-developing (primary) dorsal and
ventral melanophore stripes (1D, 1V); and later-developing (secondary) dorsal
and ventral melanophore stripes (2D, 2V). Additionally, between adult
melanophore stripes are xanthophore-rich `interstripe' regions. For
simplicity, we use the term `stripes' to refer exclusively to the adult
primary melanophore stripes (1D, 1V), unless indicated otherwise.
Microscopy, imaging and quantitative analyses
To examine melanophore behavior, we repeatedly imaged individual larvae
during pigment pattern metamorphosis, allowing us to follow the appearance,
disappearance and migration of individual melanophores
(Parichy et al., 2000b
;
Parichy and Turner, 2003b
).
Individually reared fish were anesthetized with MS222 (Sigma) and imaged every
24 hours using an Olympus SZX-12 stereozoom microscope. To ensure that we
could follow cells at the edges of the flank, all fish were imaged lying
parallel to the camera, and also on a specially constructed stand providing an
angle 30° from normal. Images were transferred to Adobe Photoshop CS for
analysis, in some cases in conjunction with the FoveaPro 3.0 image processing
and analysis package (Reindeer Graphics).
Individual melanophores were tracked as previously described
(Parichy et al., 2000b
;
Parichy and Turner, 2003b
),
with newly differentiated melanophores clearly distinguishable from
pre-existing melanophores by their initially lighter melanization (and in some
instances different color, see below). We identified individual melanophores
present in the early larval pigment patterns, then examined the fates of these
cells by examining their positions in sequential images. In following early
larval melanophores through metamorphosis, we could not formally observe cell
division in static image series, so we tracked only one presumptive daughter
following likely mitoses. Thus, our counts and estimated proportions of early
larval melanophore contributions to later stages in D. nigrofasciatus
are conservative and may underestimate true values to some degree. For
comparisons of early larval and metamorphic melanophore numbers between
species, we defined an area of interest bounded anteriorly by the anteriormost
anal fin ray insertion and posteriorly at two myotomes anterior to the caudal
peduncle. We counted individual early larval melanophores unilaterally within
this region. We determined total adult melanophore numbers within this region,
either within the adult ventral primary melanophore stripe, if present, or at
an equivalent dorsoventral position as observed in D. rerio, with a
height defined arbitrarily as one-quarter the flank height, as measured at the
anterior boundary. In final images from each individual, all melanophores in
the region of interest were marked and counted, either by eye or by the Count
plug-in of FoveaPro 3.0. Numbers of metamorphic melanophores were thus
calculated as the difference between the total numbers of melanophores
identified in the final images, and the numbers of melanophores that had been
followed into the region of interest from early larval stages. Statistical
analyses were performed with JMP 5.0.1a Statistical Software (SAS Institute,
Cary, NC). Additional information on quantitative image analyses is available
on request.
Cell transplantation and genetic mosaic analysis
We transplanted cells between mid-blastula stage [3.3-3.8 hours
post-fertilization (hpf)] D. rerio and D. nigrofasciatus
embryos, using a Narishige IM-9B micrometer-driven microinjection apparatus
mounted on a Narishige micromanipulator. We placed embryos in agar-lined
dishes containing 10% Hanks solution plus 1% penicillin/streptomycin, and
dechorionated embryos with fine forceps. We transplanted 20-100 cells into
each recipient and reared chimeric individuals through adult stages. To
identify donor D. rerio cells in D. nigrofasciatus hosts, we
used donors that were transgenic for EGFP driven by a ubiquitously expressed
D. rerio ß-actin promoter, kindly provided by Ken Poss
(Parichy and Turner, 2003a
;
Parichy et al., 2003
). To
identify donor D. nigrofasciatus melanophores in D. rerio
hosts, we used hosts mutant for albino or nacre
(mitfa), which fail to develop melanin and melanophores,
respectively. Both of these mutant loci normally act autonomously to the
melanophore lineage, as revealed previously
(Lin et al., 1992
;
Lister et al., 1999
;
Parichy and Turner, 2003a
) and
confirmed in control experiments performed for the present analyses (data not
shown). Previous studies reveal minimal local correlation between the
distributions of pigment cells and other tissues in genetic mosaics examined
at metamorphic and adult stages
(Maderspacher and Nusslein-Volhard,
2003
; Parichy and Turner,
2003a
; Parichy et al.,
2003
). We confirmed that donor melanophores typically develop
independently of other local donor tissues in a subset of chimeras in which
donor embryos were injected with rhodamine dextran prior to the four-cell
stage, then were examined for the distribution of melanophores and other
tissues at 4 dpf (data not shown). We sorted chimeras at 3 dpf for the
presence or absence of donor melanophores, and as larvae approached
metamorphosis, we repeatedly imaged individual larvae to follow the behavior
of early larval melanophores and to assess the distribution of metamorphic
melanophores. Survival rates for interspecific chimeras were typically 5-10%
of that observed for comparable experiments involving only D. rerio
(Parichy and Turner, 2003a
;
Parichy et al., 2003
),
suggesting some species incompatibilities;
1% of chimeras were
informative for analyses of pigment pattern formation (see Results).
In situ hybridization and histology
We used in situ hybridization to detect transcripts for melanophore lineage
markers, as described previously (Parichy
et al., 2000a
; Parichy et al.,
2000b
; Parichy et al.,
2003
). Larvae were fixed briefly in 4% paraformaldehyde, 1% DMSO
in PBS, decapitated, and then fixed overnight at 4°C. Larvae were
transferred to methanol, rehydrated to PBST (PBS with 0.2% Tween-20), then
treated for 20 minutes at room temperature with 20 µg/ml proteinase-K in
PBST containing 1% DMSO. Larvae were postfixed for 20 minutes at room
temperature in 4% paraformaldehyde, 0.005% glutaraldehyde, washed in PBST,
then washed three times in hybridization solution lacking tRNA and heparin.
Prehybridizations were performed overnight at 60°C in hybridization
solution (50% formamide, 5xSSC, 500 µg/ml yeast tRNA, 50 µg/ml
heparin, 0.2% Tween-20, 9.2 mM citric acid). Hybridizations were performed at
60°C over two nights, in fresh hybridization solution containing
digoxigenin-labeled riboprobes fractionated to
300 nucleotides. Larvae
were then washed twice, for 15 minutes each, in 2xSSCT, and three times,
for 2 hours each, in 0.2xSSCT at 60°C. After graded changes to PBST,
larvae were blocked overnight at 4°C in 2 mg/ml BSA, 5% heat-inactivated
calf serum in PBST, then incubated at 4°C over two nights in fresh
blocking reagent containing 1:5000 anti-digoxigenin alkaline
phosphatase-conjugated Fab fragments (Roche). Larvae were washed over two
nights in PBST, transferred to alkaline phosphatase buffer [100 mM Tris (pH
9.5), 50 mM MgCl2, 100 mM NaCl, 0.1% Tween-20], and the color
developed with NBT/BCIP.
To assay for tyrosinase activity, larvae were fixed for 2 hours in 4%
paraformaldehyde in PBS, rinsed three times in PBS, incubated in 0.1%
L-dopa (Sigma) for 1 hour to overnight, rinsed in PBS, then stored
in glycerol (Camp and Lardelli,
2001
; McCauley et al.,
2004
). We verified the specificity of the assay for melanoblasts
by the reduced staining on the flanks of metamorphosing nacre mutant
D. rerio, which have defects in the melanophore lineage
(Lister et al., 1999
;
Parichy et al., 2000b
), and we
verified that newly melanized (tyrosinase+) cells are not
macrophages by Neutral Red staining
(Herbomel et al., 1999
) (data
not shown).
Phylogenetic analysis
We reconstructed phylogenetic relationships based on mitochondrial 12S and
16S rDNA sequences, obtained using standard methods and universal primers
(Kocher et al., 1989
;
Palumbi et al., 1991
).
12S: H1478, 5'-TGA CTG CAG AGG GTG ACG GGC GGT GTG T-3'; L1091,
5'-AAA AAG CTT CAA ACT GGG ATT AGA TAC CCC ACT AT-3'.
16S: 16Sar-L, 5'-CGC CTG TTT ATC AAA AAC AT-3'; 16Sbr-H,
5'-CCG GTC TGA ACT CAG ATC ACG T-3'.
Sequences were aligned using CLUSTAL-W, inspected by eye and edited as
necessary. We then analyzed combined 12S and 16S sequences (784 nucleotides)
using maximum likelihood estimation in PAUP* 4.0b10 for Macintosh
(Swofford, 2002
). Maximum
likelihood analyses used a general time-reversible plus gamma model.
Substitution rate matrix, nucleotide frequencies, and among site rate
variation were estimated from the data by preliminary parsimony analyses using
a heuristic search strategy. Maximum likelihood, parsimony and distance
methods produced trees with the same topology. To estimate confidence values
for reconstructed nodes, we performed two independent analyses. First, we
performed 100 nonparametric bootstrap replicates using PAUP*.
Second, we performed a Bayesian analysis of the data using MrBayes
(Larget and Simon, 1999
;
Huelsenbeck and Ronquist,
2001
; Wilcox et al.,
2002
), with 3000 replicate trees from 300,000 generations
following the approach to asymptotic likelihood values. Both approaches gave
nearly identical confidence values, which we report as percentages of
recovered trees in the phylogram (see Results).
 |
Results
|
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Different modes of pigment pattern metamorphosis in D. rerio and D. nigrofasciatus
To assess the generality of adult pigment pattern-forming mechanisms, we
investigated whether stripes of different Danio species arise through
similar underlying cellular behaviors. We chose to compare the closely related
species D. rerio and D. nigrofasciatus
(Parichy and Johnson, 2001
),
for which stripes on the flank are superficially similar
(Fig. 1).
Closer inspection reveals about twice as many melanophores in D.
rerio than in D. nigrofasciatus
(Fig. 2A,C; see below).
Melanophore colors differ as well. In D. rerio, the dorsal and
ventral stripes consist almost entirely of grey-black melanophores. Yet,
occasional brownish melanophores occur at the ventral edge of the dorsal
stripe (Fig. 2A,B), where a few
melanophores derive not from latent precursors at metamorphosis, but from the
rearrangement of embryo-derived melanophores originally present in the early
larval lateral stripe along the horizontal myoseptum
(Parichy and Turner, 2003b
).
In D. nigrofasciatus, however, both dorsal and ventral stripes
contain numerous brown melanophores (Fig.
2C,D), and melanophores are not present along the ventral myotome
edge (where the early larval ventral stripe had been). Melanophore color
variation is apparent transiently after metamorphosis, and is not equally
pronounced in all families; whether this variation reflects the age of the
melanin contained within the cells or some other biochemical difference is not
clear. Nevertheless, the differences in melanophore colors and their relative
frequencies in the adult pigment patterns of D. rerio and D.
nigrofasciatus led us to hypothesize that cryptic patterning variation
might underlie the superficially similar stripes between these species.

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Fig. 2. Similar stripes with different melanophore numbers and colors in D.
rerio and D. nigrofasciatus juveniles. (A,B) D. rerio;
(C,D) D. nigrofasciatus. (A) The ventral primary melanophore stripe
of D. rerio consists of numerous gray-black metamorphic melanophores
(arrow). Melanophores persisting from embryonic stages at the site of the
early larval ventral melanophore stripe (arrowhead) are browner than
metamorphic melanophores. (B) In the D. rerio dorsal primary
melanophore stripe, a few melanophores at the ventral edge are brown in color
(arrowhead), where a few melanophores are derived from the early larval stripe
pattern. (A',B') Schematics of fish shown in A and B, showing
black and brown melanophores. No attempt is made to precisely delineate
individual melanophore boundaries. (C) Unlike in D. rerio, the
ventral primary melanophore stripe of D. nigrofasciatus includes
numerous brown melanophores (arrowhead), in addition to black melanophores
(arrow). (D) Detail showing D. nigrofasciatus brown melanophores
(arrowhead) and black melanophores in the ventral primary melanophore stripe.
(C',D') Schematics of fish shown in C and D.
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|
To determine whether stripes develop differently in D. rerio and
D. nigrofasciatus, we imaged larvae repeatedly through pigment
pattern metamorphosis, allowing us to follow the appearance, disappearance and
movements of individual melanophores
(Parichy et al., 2000b
;
Parichy and Turner, 2003b
).
These analyses demonstrate that D. rerio stripes depend almost
entirely on melanophores that differentiate from latent precursors at
metamorphosis. By stark contrast, the superficially similar stripes of D.
nigrofasciatus arise by the reorganization of early larval melanophores,
with far fewer metamorphic melanophores.
In D. rerio, the onset of pigment pattern metamorphosis is marked
by the differentiation of single `pioneer' metamorphic melanophores over the
middle of most ventral myotomes (Fig.
3A). Subsequently, metamorphic melanophores differentiate widely
over the myotomes, between the early larval stripes
(Fig. 3B,C). The adult primary
stripes become increasingly apparent (Fig.
3D), as initially dispersed metamorphic melanophores migrate short
distances to the sites of stripe formation, and as additional metamorphic
melanophores differentiate within the stripes themselves
(Fig. 3C,D). A few early larval
melanophores migrate from the horizontal myoseptum to join the dorsal adult
primary melanophore stripe (Fig.
3D,E), but most remain in place and eventually are lost
(Parichy and Turner, 2003b
).
As fish approach the end of metamorphosis, a juvenile pattern emerges, with
adult dorsal and ventral primary melanophore stripes consisting almost
entirely of melanophores that have differentiated from latent precursors
during metamorphosis (Fig.
3E,E').

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Fig. 3. Pigment pattern metamorphosis differs between D. rerio
(A-E') and D. nigrofasciatus (F-J'). Panels shown are of
selected days from a complete image series for individual, representative
larvae. In A and F, the sites of early larval melanophore stripes are
indicated at the dorsal and ventral margins of the myotomes (horizontal
arrowheads), and at the horizontal myoseptum (squares). In D. rerio,
pigment pattern metamorphosis begins with the differentiation of pioneer
metamorphic melanophores over the ventral myotomes (A, arrow), with additional
metamorphic melanophores (B, arrow) appearing both dorsally and ventrally over
a period of several days (B-D). Adult primary stripes become evident as
dispersed melanophores migrate to sites of stripe formation and additional
metamorphic melanophores differentiate within the stripes (D,E). A few early
larval melanophores move from the horizontal myoseptum to join the adult
dorsal primary melanophore stripe (C-E, arrowheads). Near the end of pigment
pattern metamorphosis the larvae have developed an adult dorsal primary
melanophore stripe and an adult ventral primary melanophore stripe (1D, 1V,
respectively, in panel E). The adult ventral primary melanophore stripe
develops just ventral to the level of the aorta (a, in panel E), about halfway
between the horizontal myoseptum and the ventral margin of the myotomes
(E'). In D. nigrofasciatus, pigment pattern metamorphosis
begins with early larval melanophores becoming displaced from the larval
stripes (F, melanophores 1-6). Whereas some metamorphic melanophores
differentiate de novo (G,H, arrows), these are markedly fewer than in D.
rerio. As metamorphosis proceeds, melanophores initially present in the
ventral early larval stripe (H, arrowheads) become increasingly distant from
the ventral margin of the myotomes. By late stages of pigment pattern
metamorphosis, a complete adult ventral primary melanophore stripe has formed
(J), and both dorsal and ventral stripes contain numerous early larval
melanophores. The D. nigrofasciatus ventral primary melanophore
stripe develops further ventrally relative to the level of the aorta (a, J),
and closer to the ventral margin of the myotome (J'), compared to D.
rerio. Inset (J) shows brownish cast of an adult stripe melanophore (6)
that originated in the early larval stripe. (E',J') Schematics of
fish shown in E and J, showing melanophores associated with the adult primary
melanophore stripes, and residual melanophores from the early larval stripes
dorsally and ventrally, as determined by following individual melanophores
from early larval stages throughout the image series (i.e. by analyzing cell
lineage rather than by examination of final melanophore colors). For
consistency with Fig. 2,
melanophores that originated in the early larval pattern are shown in brown,
and melanophores that differentiated during metamorphosis are shown in black.
Dorsal metamorphic melanophores that will cover the dorsum and dorsal scales
are omitted for clarity. Double arrowheads in B and F indicate deep, internal
melanophores that are ventral to the notochord, or dorsal to the neural tube,
respectively, and that do not contribute to pigment patterns beneath the skin.
Standard lengths of larvae (mm): A, 6.7; B, 7.4; C, 8.6; D, 10.3; E, 11.5; F,
6.7; G, 7.1; H, 8.6; I, 9.4; J, 10.3.
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In D. nigrofasciatus, pioneer metamorphic melanophores are absent
and the onset of pigment pattern metamorphosis is marked by a loss of
cohesiveness within the early larval stripes
(Fig. 3F). Gradually, early
larval melanophores are visible more laterally over the myotomes;
rearrangements of melanophores relative to one another indicate that movements
result in part from migration (as opposed to passive movement due to growth;
Fig. 4). A few metamorphic
melanophores differentiate but these are drastically reduced in number
compared with in D. rerio (Fig.
3G). As metamorphosis proceeds, early larval melanophores are
increasingly observed at sites of adult stripe formation, and additional
metamorphic melanophores differentiate at these sites
(Fig. 3H). As compared with
D. rerio, the D. nigrofasciatus dorsal stripe occurs at
approximately the same dorsal-ventral location, whereas the ventral stripe
lies closer to the ventral edge of the myotomes
(Fig. 3E',J'). By
the end of pigment pattern metamorphosis, the pattern consists of dorsal and
ventral stripes comprising a relatively high proportion of early larval
melanophores (Fig. 3I,J).
Differences in pigment pattern metamorphosis between species are particularly
evident in animations compiled from multiple images of individual larvae (see
Movies 1, 2 in supplementary material).

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Fig. 4. Migration of melanophores during D. nigrofasciatus pigment pattern
metamorphosis. Early larval melanophores (1, 2, 4, 5) and newly
differentiating metamorphic melanophores (3) change positions as stripes form.
Some changes in position are likely to reflect passive movements due to growth
(e.g. increasing dorsal-ventral separation of melanophores 4 and 5), whereas
others can be explained only by active rearrangements (e.g. relative
dorsal-ventral positions of melanophores 1 and 2). Only selected days from the
complete image series are shown. To maintain the same region of interest,
images in this figure and in Figs
6,
9 and
12 are rescaled across days;
exact sizes and stages are available on request.
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Our analyses demonstrate that superficially similar stripes in two closely
related species develop in markedly different ways: in D. rerio,
stripes arise almost entirely by the differentiation of melanophores from
latent precursors during metamorphosis; in D. nigrofasciatus, stripes
arise largely through the reorganization of early larval melanophores, with
metamorphic melanophores playing a smaller role.
Ancestral role for metamorphic melanophores in adult pigment pattern development and derived patterning mechanisms in D. nigrofasciatus
The relative contributions to adult pigment patterns of early larval
melanophores and metamorphic melanophores could vary continuously across
species. Alternatively, either the D. rerio or the D.
nigrofasciatus mode could be typical. To distinguish between these
possibilities, and to determine which, if either, mode is ancestral and which
is derived, we sought to examine pigment pattern metamorphosis in additional
species.
Because danio relationships remain poorly understood, we first sequenced
12S and 16S rDNA from additional taxa to infer phylogenetic relationships
(Fig. 5). These analyses
confirm the close relationship between D. rerio and D.
nigrofasciatus, as well as D. kyathit
(Fig. 1). The phylogeny also
supports a split between Danio and Devario [formerly within
Danio (Fang, 2003
)].
Moreover, these data reveal additional pigment pattern diversity within
Danio (as defined in Fig.
5): these fish have been known to have horizontal stripes, spots,
uniform patterns, and more complex pigment patterns; Danio choprae
adds vertical barring to the repertoire
(Fig. 1).

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Fig. 5. Phylogenetic relationships of danios inferred from 12S and 16S rDNA
sequences. Shown is a maximum-likelihood tree (branch lengths proportional to
estimated divergence). Support values are percentages from Bayesian analysis
followed by nonparametric bootstrapping. Taxa in red and green were chosen for
analyses of pigment pattern metamorphosis based on phylogenetic position and
embryo availability. The analysis supports the division of the danios into two
genera, Danio and Devario, based on morphological criteria
(Fang, 2003 ), and is in
general agreement with previous molecular analyses of fewer taxa
(Zardoya et al., 1996 ;
Parichy and Johnson, 2001 ).
GenBank Accession numbers for 12S and 16S sequences are (top to bottom):
AY707450, AY707456; U21372, U21381; AF3226h58, AF322663; AY707446, AY707452;
AF322663; AY707449, AY707455; AY707447, AY707453; AF322656, AF322661; U21376,
U21384; AF322659, AF322664; U21377, U21377; U21375, U21370; AY707448,
AY707454; U21553, U21554; AF322660, AF322665; U21378, U21386; AY707445,
AY707451. Published sequences for D. aff. tweediei and
D. pulcher were excluded owing to their limited length and the
resulting loss of phylogenetic resolution.
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Our analyses of additional species demonstrate that adult pigment patterns
form primarily by the recruitment of metamorphic melanophores, rather than by
the reorganization of early larval melanophores. Using inferred phylogenetic
relationships as a guide (Fig.
5), we chose additional species representing Danio and
more distant groups, as well as a range of adult pigment patterns, and we
repeatedly imaged larvae through metamorphosis.
Fig. 6 shows the ventral flank
for representative larvae of D. nigrofasciatus, D. rerio, D. kyathit, D.
kerri, D. albolineatus, D. choprae, and Tanichthys albonubes. In
each species, the early larval pigment patterns are nearly identical
(Fig. 6, row 1; see also Fig.
S1 in supplementary material). Subsequently, melanophores differentiate from
latent precursors during metamorphosis to generate the adult pigment pattern
(Fig. 6, rows 2-8). Only in
D. nigrofasciatus do large numbers of early larval melanophores
become incorporated into adult stripes; a few early larval melanophores move
small distances from their initial positions in D. kerri, D. albolineatus,
D. choprae, D. shanensis (data not shown) and T. albonubes, but
these do not contribute substantially to the adult pattern.

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Fig. 6. Primary role for metamorphic melanophores in adult pigment pattern
formation across species. Shown are repeated images of the same region of the
ventral flanks in representative individuals of D. nigrofasciatus, D.
rerio, D. kyathit, D. kerri, D. albolineatus, D. choprae, and T.
albonubes (compare with Fig.
1). Only selected images are shown from the complete series for
each individual. Row 1, shortly after the onset of pigment pattern
metamorphosis in each species. Row 8, terminal stages of pigment pattern
metamorphosis when the adult pigment patterns have formed; row 8',
schematics showing melanophores present at early larval stages (brown) and
melanophores that differentiated during metamorphosis (black), as revealed by
tracing individual melanophores throughout pigment pattern metamorphosis.
Squares indicate the horizontal myoseptum; horizontal arrowheads indicate the
ventral aspect of the myotome. In D. nigrofasciatus, numerous early
larval melanophores relocate (arrowheads) from the early larval stripe along
the ventral aspect of the myotome (horizontal arrowhead, row 1) to the adult
ventral primary melanophore stripe on the flank (row 8,8'). In D.
rerio and D. kyathit, early larval melanophores typically do not
contribute to the compact stripes of the adult. In D. kerri, a more
diffuse stripe pattern arises compared with in D. nigrofasciatus, D.
rerio and D. kyathit; although a few early larval melanophores
leave their initial positions (arrowheads, row 5), they typically do not enter
into the adult stripes. In D. albolineatus, rare early larval
melanophores leave the larval stripes (arrowhead, row 6) but do not contribute
substantially to the uniformly dispersed anterior melanophores or weak
melanophore stripes posteriorly. In D. choprae, a few early larval
melanophores leave the larval stripes (arrowheads, row 7) but do not join the
horizontal adult stripes that form during metamorphosis, or the vertical
barring pattern that develops at later stages; the same early larval
melanophore behaviors are seen in the vertically striped D. shanensis
(I.K.Q. and D.M.P., unpublished). Finally, in T. albonubes, a few
early larval melanophores (arrowheads, row 6) leave the larval stripes but do
not move far onto the flank where diffuse horizontal adult stripes develop in
the adult. In all panels, larvae were imaged at a 30° angle to better
visualize the ventral-lateral margin of the flank and the early larval
melanophores, and images are rescaled to show the same region of the flank.
Slight differences in starting pigment patterns (row 1) principally reflect
inter-individual variation and minor differences in developmental stage.
nigrof, D. nigrofasciatus; alb, D. albolineatus; T. alb,
T. albonubes. Number of larvae examined: D. nigrofasciatus, 10;
D. rerio, 5; D. kyathit, 5; D. kerri, 2; D.
albolineatus, 4; D. choprae, 2; T. tanichthys, 4.
Overall contributions of embryonic neural crest-derived melanophores and
metamorphic melanophores are similar in other regions of developing adult
pigment patterns (data not shown).
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The greater persistence of early larval neural crest-derived melanophores
into the adult pigment pattern of D. nigrofasciatus compared with
other species is shown quantitatively in
Fig. 7A. Total numbers of early
larval melanophores do not differ dramatically across the species, yet many
more of these cells contribute to the adult pigment pattern in D.
nigrofasciatus. Variation in the total numbers of adult melanophores
across species is shown in Fig.
7B. D. nigrofasciatus and D. albolineatus (and
to a lesser extent D. kerri) each have reduced numbers of metamorphic
melanophores compared with other species. However, only in D.
nigrofasciatus is this deficit in metamorphic melanophores partly
compensated by a significantly greater contribution from early larval neural
crest-derived melanophores.

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Fig. 7. Different fates of early larval melanophores, and variation in adult
melanophore origins across species. All values are means±s.e.m. (A)
Total numbers of early larval melanophores differ somewhat across species
(F6,25=4.44, P<0.005); black letters within
bars indicate post-hoc Tukey comparisons of means and bars sharing the same
letter do not differ significantly, thus only D. nigrofasciatus and
D. kyathit differ significantly from one another. Total early larval
melanophores for each species comprise melanophores that remain in the early
larval pigment pattern during metamorphosis (light gray), and melanophores
that leave the early larval stripes during metamorphosis and localize further
laterally over the flank (brown). Different proportions of early larval
melanophores leave the adult stripes in the different species (arcsine
transformed proportions, F6,25=41.88,
P<0.0001). However, post-hoc means comparisons of numbers and
proportions indicate that D. nigrofasciatus alone differs
significantly from other species (brown letters within bars). (B) Pigment
patterns after metamorphosis differ markedly in total melanophore numbers
across species (F6,25=18.93, P<0.0001). In all
species, a majority of melanophores in the adult pigment pattern are
metamorphic melanophores. Numbers of early larval neural crest-derived
melanophores in the adult pattern are the same as in A. In adult pigment
patterns, the proportions of early larval melanophores to metamorphic
melanophores differ significantly among species (arcsine transformed
proportions, F6,25=54.56, P<0.0001), yet only
D. nigrofasciatus differs significantly from other species in
post-hoc means comparisons. nigrof, D. nigrofasciatus; kyath, D.
kyathit; alb, D. albolineatus; T. alb, T.
albonubes.
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Adult pigment patterns of these species thus arise principally from
metamorphic melanophores with little contribution from early larval
melanophores. This finding supports a model in which Danio adult
pigment patterns depend ancestrally on metamorphic melanophores, with D.
nigrofasciatus exhibiting an evolutionarily derived reduction in
metamorphic melanophores and a correspondingly greater role for neural
crest-derived early larval melanophores in generating the adult pigment
pattern.
D. rerio mutants identify a candidate pathway for metamorphic melanophore reduction and early larval melanophore morphogenesis in D. nigrofasciatus
D. rerio mutants can identify genes and pathways that contribute
to interspecific pigment pattern differences
(Parichy and Johnson, 2001
).
Given the reduced number of metamorphic melanophores in D.
nigrofasciatus compared to D. rerio, we investigated whether
genes isolated as D. rerio mutants with defects in melanophore
development also contribute to the difference between species. We used
interspecific hybrids to test for complementation of D. rerio mutant
alleles by crossing mutant D. rerio to D. nigrofasciatus and
comparing these tester (mutant) hybrids to control (wild-type) hybrids. Tester
hybrids exhibiting fewer melanophores than controls identify genes that may
contribute to the interspecific difference, whereas tester hybrids that have
similar melanophore numbers to controls identify genes less likely to have
major effect roles.
Control hybrids between wild-type D. rerio and D.
nigrofasciatus have phenotypes intermediate between species. Whereas
melanophore numbers in primary adult stripes are increased over D.
nigrofasciatus and are closer to D. rerio, melanophore numbers
in secondary adult stripes, and the total numbers of stripes, are closer to
D. nigrofasciatus than D. rerio
(Fig. 8A)
(Parichy and Johnson, 2001
).
Comparing adult hybrid phenotypes does not reveal gross non-complementation of
the recessive melanophore mutants sox10ut.r13e1,
tfap2ats213, bonaparteut.r16e1,
cezanneut.r17e1, degasut.r18e1,
oberonj198e1, pissarrout.r8e1,
picassout.r2e1, primrosej199, pumaj115e1
or seuratut.r15e1 (e.g.
Fig. 8), adding to the
previously excluded loci ednrb1, fms, kit, mitfa, leopard, fritz and
jaguar (Parichy and Johnson,
2001
). Thus, genes contributing to the differences in the final
numbers of adult melanophores between species either are not likely to be
represented in this collection of 18 D. rerio pigment pattern
mutants, or differences in allelic strengths are not sufficient to reveal
non-complementation.
Although the preceding analyses tend to exclude loci from roles in reducing
the total numbers of adult melanophores in D. nigrofasciatus, they
did not explicitly address differences in early larval melanophore
morphogenesis or contributions to the adult pigment pattern. To identify
genetic pathways that might be responsible for interspecific differences in
early larval melanophore fate and adult stripe composition, we further
surveyed D. rerio mutants for morphogenetic similarities to D.
nigrofasciatus.
We first investigated whether any of several D. rerio mutants
exhibiting stripes dorsally and spots ventrally, as in D.
nigrofasciatus, might have similar modes of pigment pattern metamorphosis
to D. nigrofasciatus. Examination of one of these mutants,
ednrb1 (Parichy et al.,
2000a
), revealed little contribution of early larval melanophores
to the adult pigment pattern, unlike in D. nigrofasciatus
(Fig. 9A-D, and data not
shown). Thus, a similarity of pigment pattern elements does not predict the
underlying mode of pigment pattern metamorphosis.

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Fig. 9. Danio rerio mutants exclude and identify pathways for evolutionary
changes in D. nigrofasciatus. Shown are selected images of
representative larvae that were imaged throughout pigment pattern
metamorphosis. Schematics (bottom row) illustrate the locations of early
larval melanophores (brown) and metamorphic melanophores (black), as
determined by the tracing of individual cells from the early larval pigment
pattern into the adult pigment pattern (dorsal scale-associated melanophores
are omitted for clarity). (A-D) ednrb1 mutant D. rerio
develop an adult pattern of stripe and spots, superficially similar to D.
nigrofasciatus (Parichy and Johnson,
2001 ). Nevertheless, the underlying mode of pigment pattern
metamorphosis differs from D. nigrofasciatus, as few early larval
melanophores contribute to the developing adult stripes. Arrow in A indicates
a newly differentiated metamorphic melanophore. (E-H) puma mutant
D. rerio exhibit a severe reduction in metamorphic melanophore
numbers, whereas early larval melanophores (arrowheads) spread laterally over
the flank, similar to D. nigrofasciatus. (I,J) picasso
mutant D. rerio also have fewer metamorphic melanophores, and
increased persistence of early larval melanophores (arrowheads). (M-P) Hybrids
between D. rerio and D. nigrofasciatus exhibit fewer
metamorphic melanophores than D. rerio, yet early larval melanophores
only rarely contribute to the adult stripes (arrowheads), similar to D.
rerio but unlike D. nigrofasciatus (compare with
Fig. 3E,J). A few early larval
melanophores at the horizontal myoseptum persist into the adult pigment
pattern (as in D. rerio), but early larval melanophores along the
ventral myoseptum typically do not join the developing adult ventral primary
melanophore stripe (as in D. rerio, but unlike D.
nigrofasciatus). (Q-T) Hybrids between puma mutant D.
rerio and D. nigrofasciatus exhibit early larval melanophore
behaviors similar to those seen in D. nigrofasciatus. Although a few
early larval melanophores leave their initial positions in control hybrids
(P'), these cells are increased in number in puma tester
hybrids, particularly among melanophores in the vicinity of the anal fin
(arrowheads, T). Sites of early larval melanophore stripes are indicated at
the dorsal and ventral margins of the myotomes (horizontal arrowheads), and at
the horizontal myoseptum (squares) in A, E, I, M and Q.
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We next examined additional D. rerio mutants for similarities to
D. nigrofasciatus. We identified two recessive D. rerio
mutants, puma and picasso, with severe deficits in
metamorphic melanophores, as well as increased persistence of early larval
melanophores into the adult (Fig.
9E-L) (Parichy and Turner,
2003b
). To see whether puma or picasso
contribute to the difference between species, we tested whether early larval
melanophore fates and adult stripe compositions in tester hybrids differ from
those of control hybrids. Repeated imaging of hybrid larvae reveals that early
larval melanophores make little contribution to the adult stripes in control
(wild-type) hybrids (Fig. 9M-P;
n=9), tester picasso hybrids, or tester hybrids for two
additional mutants, pissarro and seurat (n=4,11 and
6, respectively; data not shown). In tester puma hybrids
(n=9), however, a greater number of early larval melanophores leave
their initial positions along the myotome edges and relocalize over the flank
(Fig. 9Q-T), similar to
puma mutants and D. nigrofasciatus
(Fig. 9E-L,
Fig. 3F-J). These hybrids have
somewhat reduced numbers of metamorphic melanophores initially, but this
deficit is regulated by adult stages so that adults have total melanophore
complements that are indistinguishable from control hybrids. The developmental
non-complementation phenotype of tester puma hybrids identifies
puma or genes in its pathway as candidates for contributing to the
evolutionary reduction of metamorphic melanophores, and increased contribution
of early larval melanophores to the D. nigrofasciatus adult pigment
pattern.
These results indicate that differences in total numbers of adult
melanophores between D. rerio and D. nigrofasciatus are not
likely to be explained by differences at loci already isolated as D.
rerio melanophore mutants. Moreover, similarity of adult pigment pattern
alone is not a good predictor for the underlying mode of pigment pattern
metamorphosis. By contrast, interspecific complementation tests for
melanophore morphogenesis suggest a role for puma or its pathway in
determining the relative contributions of metamorphic melanophores and neural
crest-derived early larval melanophores to the adult pigment patterns of
D. rerio and D. nigrofasciatus.
Reduction of metamorphic melanophore lineage in D. nigrofasciatus
The reduction in metamorphic melanophores in D. nigrofasciatus
could reflect a failure to recruit committed melanophore precursors
(melanoblasts) from uncommitted latent precursors or stem cells during
metamorphosis. For example, puma mutant D. rerio exhibit
severe reductions in metamorphic melanoblasts compared with wild-type D.
rerio (Parichy et al.,
2003
). If the same pathway affected in puma mutant D.
rerio has evolved between D. rerio and D.
nigrofasciatus, then fewer melanoblasts should be observed in D.
nigrofasciatus compared with wild-type D. rerio. Alternatively,
fewer metamorphic melanophores in D. nigrofasciatus could reflect a
later block in this lineage, with similar numbers of melanoblasts being
recruited from latent precursors then failing to terminally differentiate as
melanophores. To distinguish between these possibilities, we used molecular
markers and histological assays to compare D. rerio and D.
nigrofasciatus during metamorphosis.
Our examination of the melanophore lineage during metamorphosis reveals a
severe reduction in the number of melanoblasts in D. nigrofasciatus,
suggesting an early block in metamorphic melanophore development. We examined
the distribution of cells expressing transcripts for two molecular markers,
dopachrome tautomerase (dct) and tyrosinase
(tyr), which encode enzymes required for melanin synthesis and thus
identify committed melanophore precursors (as distinct from latent stem cells)
(Kelsh et al., 2000
;
Camp and Lardelli, 2001
). We
observed fewer dct+ and tyr+ cells
throughout metamorphosis in D. nigrofasciatus compared to D.
rerio (Fig. 10).
Importantly, however, we observed strong staining for each marker in fully
differentiated melanophores, and in the more rare, unmelanized cells, in
D. nigrofasciatus, demonstrating the efficacy of these probes in this
cross-species comparison.

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Fig. 10. Fewer metamorphic melanophore precursors in D. nigrofasciatus
revealed by in situ hybridization for the melanoblast markers dct
(A-F) and tyr (G-L). (A) During the early stages of pigment pattern
metamorphosis in D. rerio (e.g.
Fig. 3B), primary metamorphic
melanophores (arrowhead) differentiate over the middle of each ventral
myotome; these and a few unmelanized cells (arrow) stain for dct. (B)
The corresponding region in D. nigrofasciatus is devoid of primary
metamorphic melanophores and unmelanized dct+ cells,
although the early larval melanophores located further ventrally are
dct+ (arrowhead). (C) At middle metamorphic stages in
D. rerio (e.g. Fig.
3C,D), unmelanized (arrow) and melanized dct+
cells are abundant over the ventral myotome in the vicinity of the ventral
primary melanophore stripe. (D) In the corresponding region of D.
nigrofasciatus, only melanized cells express detectable levels of
dct, even after overdevelopment (data not shown). (E) At middle
metamorphic stages in D. rerio, unmelanized dct+
melanoblasts (arrow) are abundant in the vicinity of the dorsal primary
melanophore stripe. (F) In D. nigrofasciatus, unmelanized
dct+ cells (arrow) are infrequent compared with D.
rerio, although a few are present and differentiate as melanophores
(arrowhead), showing melanin in addition to dct staining. (G-L)
Staining for tyr expression is similar to staining for dct.
Shown are similar stages and positions to the corresponding panels in A-F.
Scale bars: 100 µm for A,B,G,H; 40 µm for C-F,I-L.
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From molecular marker analyses, we predicted that metamorphosing D.
nigrofasciatus would exhibit fewer cells that were competent to produce
melanin when provided with exogenously supplied L-dopa, which is converted to
melanin in cells expressing functional tyrosinase
(McCauley et al., 2004
).
Comparing the same regions of the flank before and after L-dopa incubation, we
observe newly melanized cells in D. rerio larvae, but only
10%
as many of these cells in D. nigrofasciatus larvae
(Fig. 11). These findings
support the conclusion that D. nigrofasciatus exhibit fewer
melanoblasts during metamorphosis than D. rerio do.

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Fig. 11. L-dopa staining for tyrosinase activity reveals fewer melanoblasts in
D. nigrofasciatus compared with in D. rerio. Shown are
larvae during middle stages of pigment pattern metamorphosis before (A,C) and
after (B,D) incubation with L-dopa. (A,B) In D. rerio, melanoblasts
are revealed by new melanin deposition (arrowheads show locations of cells
before and after incubation). (C,D) In D. nigrofasciatus, few
melanoblasts are revealed in general, and no new cells are observed in the
region shown.
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Together, these analyses demonstrate that reduced numbers of metamorphic
melanophores in D. nigrofasciatus result from an early block in the
specification of these cells or their recruitment from latent precursors,
rather than from a late block in their terminal differentiation as
melanophores.
Differences between D. rerio and D. nigrofasciatus are non-autonomous to melanophore lineages
The different modes of pigment pattern metamorphosis in D. rerio
and D. nigrofasciatus could reflect evolutionary changes that are
intrinsic (autonomous) or extrinsic (non-autonomous) to melanophore lineages.
Although species differences have been attributed to intrinsic factors
(Twitty and Bodenstein, 1939
;
Rawles, 1948
;
Schneider and Helms, 2003
),
the extensive migrations and cellular interactions during neural crest and
melanophore development imply many opportunities for extrinsic factors to
generate differences in form as well
(Erickson and Perris, 1993
;
Parichy, 1996
;
Halloran and Berndt, 2003
). To
distinguish between these possibilities, we examined melanophore behaviors and
patterns in genetic mosaics. These analyses demonstrate a primary role for
extrinsic factors in determining early larval melanophore contributions to
adult stripes, as well as the positions of adult stripes on the flank.
We transplanted cells from D. nigrofasciatus to D. rerio,
and then reared chimeras through metamorphosis
(Parichy and Turner, 2003a
;
Parichy et al., 2003
). To
identify donor D. nigrofasciatus melanophores, we used D.
rerio hosts mutant for the albino locus, which acts autonomously
to the melanophore lineage to promote melanization, but does not otherwise
affect melanophore development or pigment pattern formation
(Lin et al., 1992
); D.
nigrofasciatus melanophores thus appear as the only melanized cells in a
field of unmelanized but otherwise normal melanophores
(Lin et al., 1992
;
Parichy et al., 1999
;
Kelsh et al., 2000
). To assess
the mode of pigment pattern metamorphosis, we identified chimeras that
developed D. nigrofasciatus early larval melanophores, then we
repeatedly imaged these individuals through metamorphosis.
We predicted that if species differences are autonomous to the melanophore
lineages, then donor D. nigrofasciatus early larval melanophores
should contribute to the adult ventral melanophore stripe (as in D.
nigrofasciatus); if differences between species are non-autonomous to the
melanophore lineages, then donor D. nigrofasciatus early larval
melanophores should fail to contribute to this stripe (as in D.
rerio). Fig. 12A-D shows
a representative D. nigrofasciatus
D. rerio chimera.
Donor D. nigrofasciatus early larval melanophores are present within
the early larval stripe along the ventral myotomes but do not contribute to
the adult ventral stripe. Thus, early larval melanophore morphogenesis
resembles that of D. rerio rather than that of D.
nigrofasciatus (compare with Fig.
3). Moreover, D. nigrofasciatus melanophores that
differentiated during metamorphosis did so at the normal location of D.
rerio stripes, rather than further ventrally as in D.
nigrofasciatus (compare with Fig.
3). These findings indicate that factors non-autonomous to the
melanophore lineages determine species differences in early larval melanophore
contributions to adult stripes, as well as the positions of adult stripes.
These results also obviate the identification of other donor D.
nigrofasciatus cells in D. rerio hosts, as the final
distributions of donor melanophores cannot easily be explained by a simple
coincidence of D. nigrofasciatus melanophores and other D.
nigrofasciatus donor tissues (which might have explained the alternative
result, had donor melanophores behaved like their own, donor species, rather
than the host species).

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Fig. 12. Non-autonomous factors underlying the differences in pigment pattern
metamorphosis between D. rerio and D. nigrofasciatus,
revealed by interspecific genetic mosaic analyses. Shown are selected days in
the development of two representative chimeras (n=10), taken from a
complete image series through pigment pattern metamorphosis. (A-D) D.
nigrofasciatus cells transplanted into albino mutant D.
rerio. Melanized donor melanophores differentiate at embryonic stages
within the early larval melanophore stripes (arrowheads, A). Yet these donor
melanophores fail to contribute to the ventral primary melanophore stripe, as
for host melanophores. Subsequently, donor metamorphic melanophores
differentiate over the flank and contribute to adult primary melanophore
stripes located at positions that are indistinguishable from host stripes.
Arrow in D marks the primary ventral melanophore stripe (a, aorta; compare
with Fig. 3E). (F-I) D.
nigrofasciatus cells transplanted to nacre mutant D.
rerio. Despite the absence of host melanophores, donor early larval
melanophores still fail to contribute to the ventral primary melanophore
stripe, which forms in the normal position for D. rerio (arrows,
G-I). In this individual, a secondary adult melanophore stripe comprising
late-appearing metamorphic melanophores has started to form ventrally (small
arrow, I). Schematics (D',I') illustrate the locations of early
larval melanophores (brown) and metamorphic melanophores (black), as revealed
by following individual cells throughout development. Dorsal scale-associated
melanophores are omitted for clarity.
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In reciprocal D. rerio
D. nigrofasciatus chimeras
(n>40), we never observed donor D. rerio melanophores in
D. nigrofasciatus hosts, although we frequently observed
other donor tissues (e.g. myotomes, nerves, skin; data not shown). Similar
studies in D. rerio yielded comparable frequencies of these tissues,
but also melanophores (Parichy and Turner,
2003a
; Parichy et al.,
2003
). These data suggest that D. nigrofasciatus hosts
may be compromised in their ability to support D. rerio donor
melanophores, supporting a model in which species differences in metamorphic
melanophore differentiation are non-autonomous to this lineage as well.
Finally, we investigated whether evolutionary changes in interactions
between melanophores themselves might contribute to the different metamorphic
modes between species. We reasoned that a reduction in the numbers of
metamorphic melanophores, and thus reduced contact inhibition of movement
(Tucker and Erickson, 1986
),
might allow early larval melanophores to leave their initial positions during
metamorphosis in D. nigrofasciatus. To test this possibility, we
transplanted D. nigrofasciatus cells to nacre mutant D.
rerio hosts. nacre mutants lack melanophores owing to an
inactivating mutation in mitfa, which normally acts autonomously to
the melanophore lineage (Lister et al.,
1999
). We predicted that if changes in melanophore-melanophore
interactions alone are responsible for species differences, then D.
nigrofasciatus early larval melanophores in nacre mutant hosts
should contribute to the adult ventral stripe (as in D.
nigrofasciatus). If other factors contribute to the species differences,
the D. nigrofasciatus early larval melanophores should fail to
contribute to this stripe (as in D. rerio).
Fig. 12F-I shows a D.
nigrofasciatus
nacre mutant D. rerio chimera.
Repeated imaging demonstrates that donor D. nigrofasciatus early
larval melanophores do not contribute to the adult ventral stripe, which forms
at a position similar to that seen in D. rerio. These data
demonstrate that factors extrinsic to melanophore lineages contribute to
differences in pigment pattern metamorphosis between D. rerio and
D. nigrofasciatus.
 |
Discussion
|
|---|
Our analyses provide new insights into the generalized features of adult
pigment pattern metamorphosis in danios and their relatives, how these
patterns evolve, and the derived mode of pigment pattern metamorphosis in
D. nigrofasciatus. These results suggest a model relating early
larval and adult pigment pattern formation in D. rerio and other
species, and how these processes have been modified in D.
nigrofasciatus (Fig.
13).

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Fig. 13. Model for the development of early larval and adult neural crest
derivatives. In embryos, neural crest (nc) cells develop | |