First published online 24 November 2004
doi: 10.1242/dev.01547
Development 132, 89-104 (2005)
Published by The Company of Biologists 2005
Evolutionary diversification of pigment pattern in Danio fishes: differential fms dependence and stripe loss in D. albolineatus
Ian K. Quigley*,
Joan L. Manuel*,
Reid A. Roberts*,
Richard J. Nuckels,
Emily R. Herrington,
Erin L. MacDonald and
David M. Parichy
Section of Integrative Biology, Section of Molecular, Cell and
Developmental Biology, Institute for Cellular and Molecular Biology,
University of Texas at Austin, 1 University Station C0930, Austin, TX 78712,
USA
Author for correspondence (e-mail:
dparichy{at}mail.utexas.edu)
Accepted 28 October 2004
 |
SUMMARY
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The developmental bases for species differences in adult phenotypes remain
largely unknown. An emerging system for studying such variation is the adult
pigment pattern expressed by Danio fishes. These patterns result from
several classes of pigment cells including black melanophores and yellow
xanthophores, which differentiate during metamorphosis from latent stem cells
of presumptive neural crest origin. In the zebrafish D. rerio,
alternating light and dark horizontal stripes develop, in part, owing to
interactions between melanophores and cells of the xanthophore lineage that
depend on the fms receptor tyrosine kinase; zebrafish fms
mutants lack xanthophores and have disrupted melanophore stripes. By contrast,
the closely related species D. albolineatus exhibits a uniform
pattern of melanophores, and previous interspecific complementation tests
identified fms as a potential contributor to this difference between
species. Here, we survey additional species and demonstrate marked variation
in the fms-dependence of hybrid pigment patterns, suggesting
interspecific variation in the fms pathway or fms
requirements during pigment pattern formation. We next examine the cellular
bases for the evolutionary loss of stripes in D. albolineatus and
test the simplest model to explain this transformation, a loss of fms
activity in D. albolineatus relative to D. rerio. Within
D. albolineatus, we demonstrate increased rates of melanophore death
and decreased melanophore migration, different from wild-type D.
rerio but similar to fms mutant D. rerio. Yet, we also
find persistent fms expression in D. albolineatus and
enhanced xanthophore development compared with wild-type D. rerio,
and in stark contrast to fms mutant D. rerio. These findings
exclude the simplest model in which stripe loss in D. albolineatus
results from a loss of fms-dependent xanthophores and their
interactions with melanophores. Rather, our results suggest an alternative
model in which evolutionary changes in pigment cell interactions themselves
have contributed to stripe loss, and we test this model by manipulating
melanophore numbers in interspecific hybrids. Together, these data suggest
evolutionary changes in the fms pathway or fms requirements,
and identify changes in cellular interactions as a likely mechanism of
evolutionary change in Danio pigment patterns.
Key words: Zebrafish, Pigment pattern, Morphogenesis, Neural crest, fms, Csf1r, Xanthophore, Melanophore, Phylogeny, Evolution
 |
Introduction
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An outstanding challenge for developmental biology is to elucidate the
mechanisms underlying adult form, and how changes in these mechanisms produce
variation within and between species. Over the last few years, substantial
progress has been made in identifying genes associated with major
morphological differences (Galant and
Carroll, 2002
; Tanaka et al.,
2002
; Shapiro et al.,
2004
). Nevertheless, determining how genetic differences are
translated into morphological differences will require a thorough
understanding of how cellular behaviors are altered in different genetic
backgrounds. Of particular interest are the mechanisms underlying variation in
traits that have relevance to human health and disease, clear adaptive
significance in nature, or both.
One useful system for studying the genetic and cellular bases for variation
in adult form is the pigment pattern expressed by Danio fishes
(Parichy, 2003
;
Kelsh, 2004
;
Quigley et al., 2004
). These
patterns differ dramatically across species, and include horizontal stripes,
vertical bars, spots, and uniform patterns resulting from the arrangements of
several classes of pigment cells, including black melanophores, yellow-orange
xanthophores and reflective iridophores. Pigment cells in teleosts and other
vertebrates are derived from neural crest cells, which also contribute to
neurons and glia of the peripheral nervous system, bone and cartilage of the
craniofacial skeleton, adrenal chromaffin cells, endocardial cushion cells,
and other tissues (Hörstadius,
1950
; Smith et al.,
1994
; Le Douarin,
1999
). Neural crest-derived lineages are associated with a variety
of human disease syndromes (Matthay,
1997
; Amiel and Lyonnet,
2001
; Ahlgren et al.,
2002
; Widlund and Fisher,
2003
; Farlie et al.,
2004
) and have had major roles in the diversification of
vertebrates (Gans and Northcutt,
1983
; Hall, 1999
).
Besides serving as a potential model for development and evolution of other
neural crest-derived traits, pigment patterns are especially interesting
because of their ecological and behavioral significance, with teleost pigment
patterns having roles in shoaling, mate recognition, mate choice and predator
avoidance (Endler, 1983
;
Houde, 1997
;
Couldridge and Alexander,
2002
; Allender et al.,
2003
; Engeszer et al.,
2004
).
One approach to identifying the genetic and cellular bases for pigment
pattern diversity in danios has used hybrids between zebrafish, D.
rerio, and other danio species
(Parichy and Johnson, 2001
;
Quigley et al., 2004
).
Wild-type D. rerio exhibit four to five melanophore stripes
(Fig. 1A,D). When crossed with
other danios, hybrid offspring develop pigment patterns that typically
resemble D. rerio more closely than the heterospecific danio. This
finding suggested that complementation tests could be used to screen loci
identified as recessive D. rerio pigment pattern mutants for
contributions to pigment pattern differences between species: mutants for
which hybrids have pigment patterns different from controls identify genes
that may differ between species and thus identify candidates for further
analyses.

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Fig. 1. Adult stripe development and loss in danios. (A) Adult D. rerio
exhibit dark stripes of melanophores and iridophores (with few xanthophores),
alternating with light stripes of xanthophores and iridophores (with few
melanophores). (B) Adult D. albolineatus lack distinctive melanophore
stripes and exhibit only a weak interstripe region posteriorly. (C)
fms mutant D. rerio exhibit disrupted stripes in which
metamorphic melanophores are reduced and xanthophores are absent. (D) Detail
of stripes and interstripes in D. rerio. Dark cells are melanophores
and yellow-orange cells are xanthophores (arrow). Reflective iridophores are
found throughout, but are organized differently in interstripe regions
(arrowheads); under this illumination, iridophores outside of the interstripe
region are evident only by their blue iridescence over some melanophores. (E)
Detail of pigment pattern in D. albolineatus adult. Melanophores are
widely distributed over the flank. Adults exhibit reddish erythrophores
(arrow) distributed widely over the flank and interstripe iridophores
(arrowheads) form only a narrow, irregular band over part of the flank.
Erythrophores are present in several other danios as well, although not in
D. rerio. Adult fish are 25-30 mm in length. Scale bars in D: 200
µm for D,E.
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A previous study used interspecific hybrids to investigate the genetic
bases for the evolutionary loss of stripes in D. albolineatus, in
which pigment cells are nearly uniformly dispersed
(Fig. 1B,E) (Parichy and Johnson, 2001
).
Hybrids between wild-type D. rerio and D. albolineatus
develop stripes similar to D. rerio but unlike D.
albolineatus. By contrast, one of ten mutant loci tested yielded a
non-complementation phenotype in which hybrids lacked stripes like D.
albolineatus. This locus was identified as fms, which encodes a
type III receptor tyrosine kinase (Parichy
et al., 2000b
) known previously for roles in hematopoiesis and
osteoclast development (Yoshida et al.,
1990
; Stanley et al.,
1997
; Dai et al.,
2002
; Scheijen and Griffin,
2002
; Barreda et al.,
2004
). Analyses of D. rerio fms mutants
(Fig. 1C) demonstrate that
fms promotes the development of a late-appearing population of adult
melanophores that differentiates from latent stem cells during the
larval-to-adult transformation, or metamorphosis
(Parichy et al., 2000b
).
fms also is essential for melanophore survival and migration into
stripes, although melanophores themselves do not detectably express
fms. Rather, fms is expressed by cells of the xanthophore
lineage and is essential for recruiting xanthophores from latent precursors.
In turn, interactions between melanophores and fms-dependent cells of
the xanthophore lineage are required for melanophore stripe formation
(Parichy and Turner,
2003a
).
In this study, we test whether changes in fms or
fms-dependent cell lineages underlie pigment pattern differences
between D. rerio and D. albolineatus, as well as other
danios (Parichy and Johnson,
2001
). We first identify additional species for which pigment
patterns of hybrids depend on fms, and show that stripe loss in
D. albolineatus hybrids depends on fms and other modifier
loci. We next ask whether pigment pattern development in D.
albolineatus resembles that of fms mutant D. rerio, as
would be predicted by the simplest model in which a loss of fms
activity has contributed to the evolutionary loss of stripes in D.
albolineatus. We find that melanophore deficits and behaviors in D.
albolineatus are similar to fms mutant D. rerio, yet
D. albolineatus exhibit a dramatic increase - rather than a decrease
- in xanthophore numbers. These findings reject the simplest model in which
stripe loss in D. albolineatus depends on a loss of fms
activity and a corresponding loss of the xanthophore lineage. Finally, we use
interspecific hybrids to test an alternative model in which evolutionary
changes in pigment cell interactions are responsible for stripe loss. Together
these results identify interspecific variation in the fms pathway or
cellular requirements for fms activity, and support a model in which
evolutionary changes in pigment patterns depend in part on alterations in
melanophore interactions.
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Materials and methods
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Fish stocks and rearing conditions
Fish were reared at 28.5°C (14 hour light: 10 hour dark). Danio
rerio were the inbred mapping strain ABut or a mixed genetic
background comprising ABut, wikut, ekkwill and other
stocks. Danio aff. albolineatus, D. choprae, D. aff.
dangila, D. `hikari' and D. aff. kyathit were from
Transship Discounts (Jamaica, NY, USA). The precise taxonomic status of the
stocks is uncertain. Danio albolineatus were derived from stocks
provided by M. McClure (Cornell University).
Complementation tests between D. rerio and heterospecific danios
were performed as described (Parichy and
Johnson, 2001
). When mutant loci were mapped, we examined hybrid
phenotypes in crosses segregating the mutant allele to control for allelic
variation at other unlinked loci, and we genotyped hybrid offspring by PCR.
Danio rerio mutants used for interspecific complementation tests have
been described: sox10 (colourless)
(Dutton et al., 2001
);
endothelin receptor b1 (ednrb1, roseb140)
(Parichy et al., 2000a
);
tfap2a (lockjawts213)
(Knight et al., 2003
;
Knight et al., 2004
);
mitfa (nacrew2)
(Lister et al., 1999
);
jaguarc7 (Fisher et
al., 1997
); and pumaj115e1
(Parichy and Turner, 2003b
;
Parichy et al., 2003
).
Additional mutants were derived from on-going mutagenesis screens (D.M.P.,
unpublished).
Nomenclature for pigment pattern elements
Previous studies defined elements of the adult pigment pattern in D.
rerio (Parichy and Johnson,
2001
; Parichy and Turner,
2003b
), including the first developing or `primary' melanophore
stripes (1D, 1V) that develop dorsal and ventral to the horizontal myoseptum,
as well as later-developing `secondary' dorsal and ventral melanophore stripes
(2D, 2V). We refer to the xanthophore-rich areas between melanophore stripes
as `interstripe' regions.
Genotyping
fms genotyping was accomplished by primer extension assays using
conditions described (Parichy and Turner,
2003a
). A 100 bp product was amplified from genomic DNA using
forward and reverse primers flanking the fmsj4e1 mutant
lesion (fms-j1f, ACT CTT GGT GCT GGT GCG TTT G; fms-j1r, CTT TGA GCA TTT TCA
CAG CC) (Parichy et al.,
2000b
). Wild-type D. rerio or D. albolineatus
fms alleles result in the addition of two nucleotides (ddCA), whereas the
D. rerio fmsj4e1 allele results in addition of four
nucleotides (ddCTTA) to the extension primer (fms-j1r). Genotyping
methods for other loci used in interspecific complementation tests are
available on request.
In situ hybridization and histology
Methods for in situ hybridization, as well as tyrosinase assays and
controls followed those described previously
(Quigley et al., 2004
).
Imaging and quantitative analysis
We examined melanophore behaviors by imaging individual larvae once-daily
or twice-daily beginning when melanophores first appear outside of early
larval melanophore stripes (
14 days post-fertilization, dpf)
(Parichy et al., 2000b
;
Parichy and Turner, 2003b
),
through development of the adult pigment pattern (46 dpf; once-daily series)
or middle stages of pigment pattern metamorphosis (35 dpf; twice-daily
series). Images were acquired with a Zeiss Axiocam HRc digital camera mounted
on an Olympus SZX12 stereozoom microscope then transferred to Adobe Photoshop
for analysis with FoveaPro 3.0 (Reindeer Graphics).
To quantify melanophore numbers, three regions of the anterior flank in
both D. rerio and D. albolineatus were defined to represent
the location of the ventral primary melanophore stripe, the primary
interstripe, and the region populated by dorsal and scale-associated
melanophores in D. rerio. Regions were defined by measuring the
height (h) of the flank at the anterior margin of the anal fin; the
measurement areas were then placed 0.5 h anterior from this location, and
extending 0.25 h further anteriorly. Regions were located dorsoventrally as
functions of h, according to preliminary analyses of D. rerio and
dorsoventral margins of each region were 0.1 h. All melanophores were counted
within these regions for each day of imaging using semi-automated feature
recognition. Melanophore densities were calculated according to the areas of
each region. We examined three to six individuals of each species per image
series.
To examine melanophore behaviors, we followed individual melanophores
throughout pigment pattern metamorphosis
(Parichy et al., 2000b
;
Parichy and Turner, 2003b
).
This approach allows quantification of new melanophores that arise by
differentiation or proliferation ('births') and loss of melanophores by death
or de-differentiation; we refer to losses as `deaths' based on additional
histological evidence, although we cannot formally exclude the possibility
that some melanophores disappear by de-differentiation.
We assessed melanophore movements in twice-daily image series by
determining the relative dorsal-ventral position of each melanophore followed,
with the dorsal edge of the flank receiving a value of 0, and the ventral edge
of the flank receiving a value of 1. We then examined the distances moved by
melanophores relative to flank height, and calculated net dorsal-ventral
changes in melanophore position as the difference between final and initial
positions. Negative dorsal-ventral changes reflect dorsal movements, whereas
positive dorsal-ventral changes reflect ventral movements. Total movements
were calculated as the absolute values of these displacements. In once-daily
image series, we overlayed sequential images that had been rescaled to correct
for growth and aligned to minimize overall melanophore displacements and we
calculated changes in melanophore position in any direction as proportions of
flank height. In both approaches, using relative as opposed to absolute
distances controls to some degree for passive movements due to growth, but
cannot control entirely for potential differences in growth pattern between
species. Thus, we further verified the magnitude of melanophore movements
between species by examining relative changes in melanophore position that
cannot be accounted for simply by passive movements. These rearrangements are
consistent with quantitative analyses and are most easily viewed in animations
(see below).
Statistical analyses were performed with JMP 5.0.1a for Macintosh (SAS
Institute, Cary NC, USA). Residuals were examined for normality and
homoscedasticity (Sokal and Rohlf,
1994
). Total melanophore numbers, melanophore births and
melanophore deaths were examined by nested analyses of variance, in which
individuals were nested within species and day of development was treated as a
categorical variable and main effect. Births and deaths were square-root
transformed prior to analyses to normalize residuals. Melanophore movements
were examined by nested analyses of variance or covariance in which species
differences were tested after controlling for variation among individuals
(nested within species). To assess species differences in absolute movements
of melanophores, we calculated absolute values for net directional movements.
To assess species differences in directional melanophore movements, we
controlled additionally for variation among anteroposterior regions (anterior,
middle, posterior; nested within individuals), and we treated melanophore
starting position as a covariate; dorsal and ventral regions of the flank were
analyzed separately owing to differences suggested by preliminary analyses.
Absolute and directional movements were arcsine-transformed prior to analyses.
Least squares means from these analyses are reported below. Alternative
parameterizations of statistical models yielded qualitatively similar
results.
Phylogenetic analysis
Phylogenetic relationships were reconstructed from mitochondrial 12S and
16S rDNA sequences (12S: H1478, 5'-TGA CTG CAG AGG GTG ACG GGC GGT GTG
T-3'; L1091, 5'-AAA AAG CTT CAA ACT GGG ATT AGA TAC CCC ACT
AT-3'; 16S: 16Sar-L, 5'-CGC CTG TTT ATC AAA AAC AT-3';
16Sbr-H, 5'-CCG GTC TGA ACT CAG ATC ACG T-3')
(Kocher et al., 1989
;
Palumbi et al., 1991
).
Analyses were performed as described
(Quigley et al., 2004
) using
PAUP* 4.0b10 and MrBayes
(Huelsenbeck and Ronquist,
2001
; Swofford,
2002
).
 |
Results
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Comparative fms dependence of hybrid pigment patterns
Hybrids between wild-type D. rerio and D. albolineatus
develop stripes, whereas hybrids between fms mutant D. rerio
and D. albolineatus lack stripes
(Parichy and Johnson, 2001
).
Given this association between fms and hybrid stripe loss in D.
albolineatus, and the critical role for fms in melanophore
stripe formation in D. rerio, we examined the fms dependence
of hybrid pigment patterns for other danios. For each species, melanophore
patterns of control hybrids with wild-type D. rerio resembled D.
rerio more closely than the heterospecific danio
(Fig. 2).

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Fig. 2. Comparative analyses reveal fms-dependence of hybrid pigment
pattern formation across Danio species. (A) Phylogenetic
relationships. The traditional grouping of danios comprises at least two major
clades, `Danio' and `Devario'
(Kullander, 2001 ;
Fang, 2003 ). Heterospecific
danios with names in color were used for interspecific complementation tests
with fmsj4e1 mutant D. rerio. Colors of names
indicate fms-dependence of hybrid (or heterozygous) pigment pattern:
red, strong fms-dependence; green, mild
fms-dependence; blue, no apparent fms-dependence
(see text). (B,E,H,K,N,Q) Danio wild-type pigment patterns.
(C,F,I,L,O,R) Control hybrids between wild-type D. rerio and
heterospecific danios. (D,G,J,M,P,S) Hybrids between
fmsj4e1 mutant D. rerio and heterospecific
danios. (B-D) Danio albolineatus lack distinctive stripes whereas
control hybrids develop stripes with irregular borders; fms mutant
hybrids lack stripes. (E-G) Danio aff. albolineatus
resembles D. albolineatus but has a reduced interstripe region
posteriorly and the anal fin lacks a melanophore stripe; these fish may
represent a divergent population of D. albolineatus or a closely
related species (Fang and Kottelat,
2000 ). Control hybrids develop stripes with irregular borders like
D. albolineatus control hybrids; fms mutant hybrids lack
distinctive stripes. (H-J) Danio `hikari' resembles D. kerri
(Parichy and Johnson, 2001 ):
melanophore stripes are broad and diffuse and include very few xanthophores;
interstripe regions are narrow and irregular by comparison with D.
rerio (Fig. 1A). Control
hybrids develop distinctive melanophore stripes and interstripes with regular
borders. Tester fms mutants have fewer xanthophores than controls.
(K-M) Danio aff. kyathit resembles D. rerio
initially but develops fissures in melanophore stripes as the fish grows;
D. aff. kyathit also exhibit red erythrophores, particularly
in the fins. Control hybrids lack stripe fissures, and fms mutant
hybrids are not discernibly different (minor differences between control and
tester hybrids are within the range of variation exhibited by different
families within genotypes). (N-P) Danio choprae transiently develop
horizontal stripes, then lose these stripes as a uniform pattern of
melanophores emerges; vertical bars of melanophores arise in adults. Control
hybrids develop and maintain horizontal stripes resembling those of D.
rerio whereas fms mutant hybrids have fewer melanophores and
xanthophores and less organized patterns. (Q-S) Danio aff.
dangila adults have melanophore stripes interrupted by lighter spots
and interstripes, and are morphologically indistinguishable from D.
dangila (Parichy and Johnson,
2001 ). Control hybrids resemble D. rerio, and
fms mutant hybrids exhibit no clear difference from controls. Data
not shown: Danio nigrofasciatus exhibit well-defined stripes and
control hybrids are intermediate between D. rerio and D.
nigrofasciatus parental species
(Parichy and Johnson, 2001 ;
Quigley et al., 2004 ); tester
hybrids do not differ from controls for either fmsj4blue
(Parichy and Johnson, 2001 ) or
fmsj4e1. Tester fmsj4e1 hybrids could
not be obtained for D. kerri; tester fmsj4blue
hybrids resemble control hybrids, similar to tester
fmsj4blue hybrids with D. albolineatus, likely
reflecting modifier loci in the fmsj4blue background (see
text). Hybrids with species outside of the Danio clade (A) were not
viable, consistent with previous observations
(Parichy and Johnson, 2001 ).
All fish are between 25-35 mm standard length, except D. dangila and
its hybrids, which are 50-80 mm. GenBank accession numbers for 12S and 16S
sequences used in phylogeny reconstruction were: AY707450, AY707456; U21372,
U21381; AF322658, AF322663; AY707446, AY707452; AF322663; AY707449, AY707455;
AY707447, AY707453; AF322656, AF322661; U21376, U21384; AF322659, AF322664;
U21377, U21377; U21375, U21370; AY707448, AY707454; U21553, U21554; AF322660,
AF322665; U21378, U21386; AY707445, AY707451; AY37481, AY37482; AY37483,
AY37484.
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Our analyses reveal fms-dependent hybrid pigment patterns for
additional taxa (Fig. 2A). For
both D. albolineatus and D. aff. albolineatus,
fmsj4e1 hybrids lacked stripes
(Fig. 2B-G). For D.
`hikari', fmsj4e1 hybrids developed normal melanophore
stripes but fewer xanthophores than controls
(Fig. 2B-J,
Fig. 3A,B). Within the clade
that includes D. rerio, D. kyathit and D. nigrofasciatus,
fmsj4e1 hybrids did not differ consistently from controls
(Fig. 2K-M)
(Parichy and Johnson, 2001
)
(data not shown). Finally, D. choprae fmsj4e1 hybrids
exhibited disrupted adult stripes and a severe xanthophore deficit
(Fig. 2N-P,
Fig. 3C-H), but D. dangila
fmsj4e1 hybrids were not discernibly different from controls
(Fig. 2Q-S).

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Fig. 3. Mild and strong fms-dependence of hybrid pigment patterns for
D. `hikari' and D. choprae. (A,B) Danio `hikari'
hybrids. (A) Wild-type control hybrids develop distinctive melanophore stripes
and interstripe regions (arrow, A), whereas fms mutant hybrids have
about half as many xanthophores as controls (B). (C-F) Danio choprae
hybrids at larval stages. (C,E) Wild-type control hybrids have numerous
xanthophores both on the body (arrow, C) and in the fins (arrowheads, E).
(D,F) fms mutant hybrids have fewer xanthophores than controls. (G,H)
Adult D. choprae control hybrids (G) have more xanthophores (arrows)
than tester fms mutant hybrids (H). Scale bars: in A, 500 µm for
A,B,G,H); in C, 150 µm for C-F.
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Thus, four out of seven danios exhibited noncomplementation phenotypes with
fmsj4e1 mutant D. rerio
(Fig. 2A); one of these was
mild (D. `hikari') and three were severe (D. albolineatus,
D. aff. albolineatus, D. choprae). Whether mild
non-complementation for D. `hikari' represents a unique derived
change for this species, or a basal change within the D.
`hikari'-D. albolineatus clade is uncertain without deeper taxonomic
sampling. Given the close phylogenetic relationship of D.
albolineatus and D. aff. albolineatus, these results
imply at least two evolutionary changes resulting in severe noncomplementation
phenotypes, one separating D. albolineatus-D. aff.
albolineatus from other danios, and another separating D.
choprae from other danios.
fms-dependent hybrid stripe disruption in D. albolineatus
Given the broader variation in fms-dependence across danios, we
sought to further test evolutionary roles for fms and
fms-dependent pathways, focusing on D. albolineatus because
of the simplicity of its pattern. Previous analyses tested D.
albolineatus hybrids for non-complementation of
fmsj4e1, fmsj4e3 and
fmsj4blue, all of which are recessive in D. rerio
and exhibit presumptive null phenotypes
(Parichy et al., 2000b
;
Parichy and Johnson, 2001
).
Hybrids for fmsj4e1 and fmsj4e3 lacked
stripes, whereas hybrids for fmsj4blue developed stripes.
Since fmsj4e1 and fmsj4e3 were
maintained in the inbred AB* (ABut) genetic background,
whereas fmsj4blue was maintained in a different
background, the formal possibility exists that other loci in the
ABut background were responsible. Alternatively, modifier loci
affecting the penetrance of a fms effect could differ across
backgrounds. Thus, we asked whether pigment pattern variation in hybrids with
D. albolineatus segregates with alleles at the fms
locus.
Our analyses support a model in which stripe disruption in hybrids depends
on fms, with the magnitude of this effect determined by additional
modifier loci. We generated heterozygous fms mutant D. rerio
by crossing fmsj4e1, maintained in the inbred background
ABut, with another inbred mapping strain, wikut. We then
crossed these
fmsj4e1(AB)/fms+(wik)
D. rerio to D. albolineatus. Hybrid offspring segregated two
phenotypes in
1:1 ratios: either well-organized, `strong' melanophore
stripes, or a poorly organized, `weak' stripe pattern, with significantly
fewer melanophores and xanthophores (Fig.
4A-F). We categorized fish into alternative `strong' and `weak'
stripe classes, then asked whether individuals carried the
fms+(wik) wild-type D. rerio allele or the
fmsj4e1(AB) mutant D. rerio allele.
Primer extension genotyping for the fmsj4e1 lesion
demonstrates that, in every instance, hybrids with `strong' stripes carried
the wild-type allele whereas hybrids with `weak' stripes carried the mutant
allele (n=105; Fig.
4G,H).

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Fig. 4. Segregation analysis supports an essential role for fms in D.
albolineatus xD. rerio hybrid stripe development.
(A,B,D,E) Tester fmsj4e1/+ hybrids exhibit either of two
easily distinguishable phenotypes, one in which stripes are well organized
(A,B), and another in which stripes are weakly organized with irregular
borders and fewer xanthophores (D,E). Differences are evident during pigment
pattern metamorphosis (A,D) but are most apparent in adults (B,E). Details
showing well-organized (C) and weakly organized (F) stripes in hybrid adults.
Pigment cell complements in hybrids with weak stripes were significantly
reduced compared with hybrids with strong stripes, with 84% of the number of
melanophores (F1,16=8.76, P<0.01) and only 14%
of the number of xanthophores (F1,16=20.85,
P<0.0005). The reduction in melanophore numbers is comparable to
that observed in homozygous fmsj4e1 mutant D.
rerio and fms174 mutant D. rerio at
restrictive temperature; however, neither D. rerio mutant allele
retains xanthophores (Parichy et al.,
2000b ; Parichy and Turner,
2003a ). (G,H). Primer extension genotyping for fms
alleles. (G) In D. rerio, an extension primer adjacent to the
fmsj4e1 lesion yields additions of two nucleotides in
homozygous wild-type individuals, additions of four nucleotides in homozygous
fmsj4e1 individuals, and additions of both two and four
nucleotides in heterozygous
fms+/fmsj4e1 individuals. (H) Primer
extension genotyping for tester fmsj4e1/+ hybrids that
have been classified as having `strong' or `weak' stripes. All hybrids with
strong stripes carry the D. rerio fms+(wik) wild-type
allele and the D. albolineatus fms allele, resulting in two
nucleotide additions to the extension primers. All hybrids with weak stripes
carry the D. rerio fmsj4e1 mutant allele and a D.
albolineatus fms allele, resulting in the addition of four and two
nucleotides to the extension primer, respectively. Scale bars: in A, 200 µm
for A,D; in B, 500 µm for B,E; in C, 200 µm for C,F.
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These data confirm that a hybrid non-complementation phenotype segregates
with fms. Yet, this phenotype is less severe than that of
fmsj4e1 (Fig.
2D) and fmsj4e3 in the ABut
background, and more severe than that for fmsj4blue in a
different background (Parichy and Johnson,
2001
). This suggests that modifier loci contribute to the
phenotype, and that these modifiers differ across genetic backgrounds.
Segregation analyses thus place the non-complementing locus in the vicinity
of fms, and suggest roles for modifier loci in determining hybrid
pigment patterns.
Temperature-sensitive fmsallele confirms role in hybrid stripe loss
We used a temperature-sensitive fms allele to further confirm the
requirement for fms in D. albolineatus hybrid pigment
pattern development. Segregation analyses placed the non-complementing locus
within
1 cM of fms, a region likely to include several other
genes. We reasoned that a fms allele demonstrated previously to
exhibit temperature sensitivity could be used to exclude roles for these
neighboring loci: a fms-specific effect should be manifested as a
complementation phenotype at the permissive temperature, and a
noncomplementation phenotype at the restrictive temperature. Thus, we used the
temperature-sensitive allele
fmsut.r4e174A
(fms174), which exhibits a wild-type phenotype at 24°C
and a fms null phenotype at 33°C
(Parichy and Turner, 2003a
).
We crossed homozygous fms174 mutant D. rerio to
D. albolineatus and reared hybrid siblings at either 24°C or
33°C. Tester fms174 hybrids reared at 24°C were
indistinguishable from control hybrids
(Fig. 5A,B), as were wild-type
hybrids reared at 33°C (data not shown). By contrast,
fms174 hybrids reared at 33°C developed poorly
organized melanophore stripes and fewer xanthophores
(Fig. 5C,D). These results
provide compelling additional evidence that hybrid non-complementation
phenotypes depend on fms, rather than on other closely linked
loci.

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Fig. 5. A temperature-sensitive allele uniquely implicates fms in
melanophore stripe disorganization and xanthophore reduction in hybrids.
Tester fms174 mutant D. rerio xD.
albolineatus hybrids were reared at 28.5°C through middle
metamorphosis, then were transferred either to 24°C or 33°C until
adult pigment patterns had formed. (A,B) fms174 hybrids
reared at 24°C develop well-organized stripes and numerous xanthophores on
the body (A) and fins (B, arrows). (C,D) fms174 hybrids
reared at 33°C develop poorly organized melanophore stripes and have fewer
xanthophores on the body (C) and fins (D, arrows). Pigment patterns of control
wild-type hybrids do not differ between 24°C and 33°C (data not
shown). Scale bars: in A, 1 mm for A,C; in B, 150 µm for B,D.
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Finally, D. albolineatus hybrids did not reveal noncomplementation
phenotypes for any of 16 other recessive D. rerio mutants affecting
pigment cell numbers and arrangements (ednrb1b140,
kitb5, mitfaw2,
sox10ut.r13e1, tfap2ats213,
cezanneut.r17e1, degasut.r18e1,
jaguarc7, leopardt1,
oberonj198e1, pissarrout.r8e1,
picassout.r2e1, primrosej199,
pumaj115e1, or seuratut.r15e1),
including bonaparteut.r16e1, which has melanophore and
xanthophore defects similar to fms mutants (D.M.P. and E.L.M.,
unpublished). Thus, D. albolineatus hybrid pigment patterns are
uniquely fms-dependent within this broader collection of loci
required for pigment pattern development.
Altered melanophore lineage development during D. albolineatus adult pigment pattern formation
Genetic analyses above reveal a strong fms dependence of hybrid
pigment pattern development for D. albolineatus (as well as D.
choprae) but do not indicate how this dependence reflects natural
variation between species. Given the noncomplementation phenotype of
fms hybrids, we reasoned initially that D. albolineatus
might exhibit a loss of fms activity relative to D. rerio.
This simple model predicts that pigment pattern metamorphosis in D.
albolineatus should resemble that of fms mutant D.
rerio. By comparison to wild-type D. rerio, fms mutants
have fewer metamorphic melanophores, increased melanophore death, decreased
melanophore movement into stripes, and an absence of xanthophores
(Parichy et al., 2000b
;
Parichy and Turner, 2003a
). We
thus asked whether D. albolineatus pigment pattern metamorphosis
entails some or all of these differences relative to wild-type D.
rerio. Our analyses reveal dramatic differences between wild-type D.
rerio and D. albolineatus
(Fig. 6; see Movies 1-4 in
supplementary material). Although some similarities are seen between D.
albolineatus and fms mutant D. rerio, there are major
differences as well (next section).

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Fig. 6. Development of adult pigment patterns in D. rerio (A-F) and D.
albolineatus (G-L). Panels shown are of selected days from a complete
image series for individual, representative larvae. (A) In D. rerio,
pigment pattern metamorphosis is marked by the differentiation of metamorphic
melanophores (arrow, showing one of many) over the myotomes. The white box in
each image delineates the horizontal myoseptum; the single arrowhead in A
indicates one of several early larval melanophores that have persisted along
the horizontal myoseptum through the beginning of metamorphosis. Double
arrowhead indicates deep melanophores along the dorsal aspect of the neural
tube; triple arrowhead, deep melanophores lining the dorsal surface of the
peritoneum. sb, swim bladder. (B) As metamorphosis proceeds, additional
metamorphic melanophores (small arrows) develop over the myotomes, and
iridophores and xanthophores differentiate ventral to the horizontal myoseptum
in the prospective primary interstripe region (large arrow). (C) By middle
stages of pigment pattern metamorphosis, melanophores have started to organize
into stripes in the region of the prospective dorsal primary melanophore
stripe (p1D) and prospective ventral primary melanophore stripe (p1V). (D) As
the dorsal and ventral melanophore stripes become increasingly distinctive,
additional late metamorphic melanophores differentiate already within these
stripes (e.g. arrow). (E) Near the completion of pigment pattern
metamorphosis, distinctive dorsal and ventral primary melanophore stripes (1D,
1V) border a well-defined interstripe region. (F) Pigment pattern
metamorphosis is completed with the development of scales and scale-associated
melanophores (s). In D. albolineatus, melanophores typically do not
persist along the horizontal myoseptum from earlier stages, and instead
melanophores, initially deeper between the myotomes, migrate to the surface
(arrowhead, data not shown). (H) Metamorphic melanophores (e.g. small arrow)
differentiate widely scattered over the myotomes, as in D. rerio, but
fewer iridophores (large arrow) develop ventral to the horizontal myoseptum.
(I,J) As metamorphosis proceeds, additional metamorphic melanophores appear
over the myotomes, yet these cells typically do not migrate far from their
site of differentiation. Relatively few late metamorphic melanophores appear
within the regions where stripes form in D. rerio (compare with D).
(K) Near the completion of metamorphosis, melanophores remain relatively
dispersed compared with D. rerio, and only a weak pattern of
melanophore stripes (arrowheads) borders an irregular and narrow interstripe
region on the posterior trunk. (L) At the end of metamorphosis, D.
albolineatus have far fewer sub-dermal melanophores than D.
rerio, and these cells are widely distributed where the interstripe
region develops in D. rerio. The interstripe region extends only to
the middle of the flank (arrow) and reddish erythrophores have started to
differentiate within this region. Images shown have been rescaled across
stages to maintain the same approximate field of view. Larval standard lengths
in mm, (A-F) 7.1, 7.7, 8.3, 9.5, 12.0, 13.3, (G-L) 8.1, 9.3, 10.1, 11.0, 12.8,
13.4. Scale bars: in A, 500 µm for A,G; in F, 1 mm for F,L.
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We first examined the temporal accumulation of melanophores. Daily image
series show that D. albolineatus exhibited only
67% as many
melanophores as D. rerio (F1,142=245.56,
P<0.0001) across the entire image series. The deficit was most
evident where melanophore stripes form in D. rerio, and became
increasingly severe at later stages (Fig.
6, Fig. 7A). Only
where the primary interstripe forms in D. rerio were melanophore
numbers greater in D. albolineatus, reflecting the more uniform
pattern of melanophores (Fig.
7B).

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Fig. 7. Quantitative analyses of melanophore morphogenesis in D. rerio and
D. albolineatus. (A) In regions where melanophore stripes develop in
D. rerio, melanophore numbers are dramatically reduced in D.
albolineatus and this deficit becomes more pronounced through pigment
pattern metamorphosis. (B) In the middle of the flank, where the first
interstripe region forms in D. rerio, melanophore numbers are
increased in D. albolineatus, reflecting the absence of a distinctive
and persistent melanophore-free region in the anterior of the flank. Despite
the increased melanophore numbers, the overall complement of melanophores is
dramatically reduced overall compared with D. rerio. (C) Analyses of
twice daily image series reveal differential appearance ('births') and
disappearance ('deaths') of melanophores between species. Shown are cumulative
mean births and deaths recorded in each of three developing larvae through
middle stages of pigment pattern metamorphosis, with `births' defined as the
appearance of new melanophores (either by differentiation or proliferation)
and `deaths' defined by the unambiguous loss of melanophores (see Materials
and methods). Melanophore births were not significantly different between
species (F1,107=1.87, P=0.2) after controlling
for variation among individuals (F4,107=2.72,
P<0.05) and across days (F21,107=5.43,
P<0.001). By contrast, melanophore deaths were significantly
greater in D. albolineatus than D. rerio
(F1,81=3.04, P<0.005) after controlling for
variation among individuals (F4,81=2.10, P=0.09)
and across days (F29,81=2.47, P<0.001). Error
bars are omitted for clarity. (D) Total melanophore movements are reduced in
D. albolineatus compared with D. rerio, both during early
and middle metamorphosis (left), and through later metamorphosis (right).
Shown are mean (±s.e.m.) distances moved by individual melanophores,
with distances expressed as percentages of the flank height. Left, species
differences were significant (F1,696=14.23,
P<0.0005; n=368, 344 melanophores in D. rerio
and D. albolineatus) after controlling for variation associated with
individuals (nested within species: F4,696=2.60,
P<0.05), and anteroposterior region nested within individuals
(F10,696=5.19, P<0.0001). Right, species
differences were significant (F1,708=8.45,
P<0.005; n=291, 419 melanophores in D. rerio and
D. albolineatus) whereas inter-individual differences were not
significant (P=0.2). (E,F) Directional movements of melanophores were
significantly reduced in D. albolineatus compared with D.
rerio. Each point represents a single melanophore followed from its first
appearance to its final position at the end of the series or until it was lost
(n=368, 344 melanophores in D. rerio and D.
albolineatus, respectively). Plots show the initial dorsoventral
positions at which melanophores first appeared, and the subsequent changes in
dorsoventral positions by the end of the images series. The dorsal-most
position on the flank is assigned a relative value of 0, and the ventral-most
position on the flank is assigned a value of 1. Regression slopes are
estimated separately for dorsal and ventral regions of the flank because of
differences in shape and growth. (E) In D. rerio, melanophores that
initially appear in more dorsal regions of the flank tend to move ventrally
whereas melanophores that initially appear in more ventral regions of the
flank tend to move dorsally (partial regression coefficients±s.e.m. for
relationship between starting dorsoventral position and arcsine-transformed
movements for dorsal and ventral regions of the flank, respectively:
-0.17±0.02, -0.14±0.04). (F) In D. albolineatus,
directional movements were significantly reduced compared with D.
rerio in dorsal regions of the flank (F1,399=6.43,
P<0.05), although species differences were not detectable in
ventral regions (F1,399=1.40, P=0.2), as assessed
by the magnitude of starting position xspecies interactions [partial
regression coefficients for dorsal and ventral, respectively:
-0.10±0.02, -0.10±0.02; after controlling in both dorsal and
ventral analyses for variation among individuals (nested within species, both
P<0.005), variation among the three examined anteroposterior
regions of the flank nested within individuals (both P<0.0005),
main effects of species (P=0.7, P<0.005, respectively),
and starting position independent of species (both P<0.0001)].
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Fewer metamorphic melanophores in D. albolineatus could reflect a
change in melanophore specification, increased rates of melanophore or
melanoblast death, or both. To distinguish among these possibilities, we first
quantified the appearance and disappearance of melanophores in a temporally
higher resolution series of images taken at 12-hour intervals. Averaged over
entire series, the D. albolineatus larvae exhibited
91% as many
melanophore `births' as the D. rerio larvae, but 376% as many
`deaths' (Fig. 7C); suggesting
that fewer melanophores in D. albolineatus does not reflect a failure
to recruit stem cells into the melanophore lineage, but to some extent a
reduction in the subsequent survival of these cells. Consistent with this
inference, numbers of melanophore precursors were not obviously reduced in
D. albolineatus, as revealed by molecular markers
(Fig. 8A-H) and tyrosinase
activity (Fig. 8I-L). Moreover,
D. albolineatus melanophores frequently appeared, then disappeared,
over short time intervals (Fig.
8M-O) and these cells, as well as L-dopastained,
tyrosinase+ melanophore precursors, were common within the
epidermis and in `extrusion bodies' at the epidermal surface, characteristic
of teleost melanophore death (Parichy et
al., 1999
; Sugimoto,
2002
; Parichy and Turner,
2003a
) (Fig.
8P,R-T); only
10% as many epidermal, melanized cells occurred
in D. rerio larvae (Fig.
8Q). These results indicate that fewer melanophores in D.
albolineatus result, at least in part, from the death of these cells and
their immediate precursors.

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Fig. 8. Altered melanophore lineage development in D. albolineatus. (A-H)
Melanophore precursor abundance does not differ dramatically between species
as revealed by distributions of cells expressing tyrosinase, dopachrome
tautomerase (dct) and mitfa
(Lister et al., 1999 ;
Kelsh et al., 2000 ;
Camp and Lardelli, 2001 ).
tyrosinase and dct encode enzymes required for melanin
synthesis, whereas mitfa encodes a transcription factor essential for
melanophore specification. (A-D) In situ hybridization for tyrosinase
mRNA in D. rerio (A,B) and D. albolineatus (C,D) during
middle stages of pigment pattern metamorphosis (equivalent to larvae shown in
Fig. 6C,I). (A) In D.
rerio, numerous tyrosinase+ melanophores and
unmelanized melanophore precursors (arrowhead) are observed in the region of
the prospective dorsal primary melanophore stripe. (B) Higher magnification
image of a different larvae showing tyrosinase+
melanophores (arrow) and melanophore precursors (arrowhead). (C) In D.
albolineatus, fewer melanophores are present but
tyrosinase+ melanophore precursors (arrowhead) are not
obviously reduced in number. (D) Higher magnification of a different larva
showing tyrosinase+ melanophores (arrowhead) and
unmelanized melanophore precursor (arrowhead). (E-H) Expression of other
melanophore lineage markers also is similar between D. rerio and
D. albolineatus. (E,F) Danio rerio exhibit unmelanized cells
(arrowheads), and some melanized cells (arrow) expressing dct (E) and
mitfa (F). (G,H) In D. albolineatus, the numbers of
unmelanized cells expressing dct (G) and mitfa are similar
to D. rerio. Results for kit and sox10-expressing
cells were similar (data not shown)
(Parichy et al., 1999 ;
Dutton et al., 2001 ). (I-L)
Tyrosinase-expressing melanophore precursors revealed by treating fixed larvae
with the essential precursor for melanin synthesis, L-dopa
(Camp and Lardelli, 2001 ;
McCauley et al., 2004 ). Images
in I and K are prior to L-dopa incubation, and images in J and L
are the same fields of view after treatment with L-dopa for 5
hours. (I,J) In D. rerio, only a few tyrosinase+
melanophore precursors are revealed by L-dopa incubation
(arrowheads). (K,L) In D. albolineatus, however, numerous
tyrosinase+ melanophore precursors are revealed by
L-dopa treatment (arrowheads show only a few of these cells). These
cells exhibit morphologies typical of melanoblasts and recently differentiated
melanophores (inset). The increased number of L-dopa stained,
tyrosinase+ cells as compared with molecular markers in D.
albolineatus may reflect perduring protein in the absence of
transcriptional activity. (M-T). Melanophores and melanophore precursors
frequently are lost in D. albolineatus. (M-O) The same region of a
D. albolineatus larvae imaged at 12-hour intervals reveals the
transient appearance of several melanophores (arrowheads). Yellow-orange cells
are xanthophores; these and other melanophores do not change positions between
images. (P) High magnification image of D. albolineatus reveals
melanin-containing debris (arrow) typical of melanophore death. Arrowhead,
melanophore precursor that acquired melanin following L-dopa
incubation of this larva. (Q-S) Cross-sections reveal the locations of
melanophores and tyrosinase+ melanophore precursors in D.
rerio (Q) and D. albolineatus (R,S). (Q) In D. rerio,
few melanophores or melanophore precursors are located within the plane of the
epidermis; one such melanophore is indicated by the arrowhead. e, epidermis;
m, myotome. Arrow indicates iridophores of the developing interstripe region.
(R) In D. albolineatus, numerous melanophores and
tyrosinase+ melanophore precursors occur within the plane of the
epidermis (arrowheads), although some melanophores are found subdermally, as
in D. rerio (arrow). (S) Higher magnification of bracketed region in
R, showing a melanin-containing extrusion body typical of teleost melanophore
death. Arrowhead indicates bounding membrane. n, neuromast. Melanin-containing
debris in P also is superficially located, as revealed by hexagonal outlines
of adjacent epidermal cells. (T) High magnification image of whole-mount
larva, showing extrusion body containing melanin granule (arrow) and staining
for dct mRNA (arrowhead). Scale bars: in A, 80 µm for A,C; in B,
40 µm for B,D; in E, 60 µm for E-H; in I, 80 µm for I-L; in P, 20
µm for P; in Q, 60 µm for Q,R; in S, 20 µm for S,T.
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Finally, we examined melanophore migration. Total distances moved by
melanophores were reduced in D. albolineatus larvae compared with
D. rerio larvae (Fig.
7D). Moreover, stripes in D. rerio develop in part
through the directional migration of initially more dispersed melanophores to
sites of stripe formation, and such movements were significantly reduced in
D. albolineatus (Fig.
7E,F). Animations of developing larvae further support the
interpretation that D. albolineatus melanophores move less than
D. rerio melanophores (see Movies 5, 6 in supplementary
material).
Melanophore morphogenesis in D. albolineatus thus resembles
melanophore morphogenesis in fms mutant D. rerio, with fewer
melanophores, increased death of cells in the melanophore lineage, and reduced
melanophore migration as compared with wild-type D. rerio.
Enhanced xanthophore development in D. albolineatus
Melanophore morphogenesis in D. albolineatus is consistent with a
model in which this species has evolved a loss of fms activity
relative to wild-type D. rerio. This model also predicts that D.
albolineatus should have fewer xanthophores, consistent with the reported
absence of xanthophores in adult D. albolineatus
(McClure, 1999
). Yet, our
analyses reject this notion: instead, we find that D. albolineatus
actually have many more xanthophores than wild-type D. rerio.
During pigment pattern metamorphosis, D. albolineatus had greater
numbers of xanthophores and these cells were distributed more widely than in
D. rerio, in which xanthophores initially occur only near the
horizontal myoseptum, and the dorsal and ventral margins of the flank
(Fig. 9A-D,F,G). Xanthophores
persist in older larvae and adult D. albolineatus, and are
interspersed with melanophores (see Fig. S1 in supplementary material).
Moreover, control hybrids between D. albolineatus and wild-type
D. rerio had an intermediate number of xanthophores relative to
parental species (Fig. 9E,H),
in contrast to the severe xanthophore deficiency of
fmsj4e1 mutant hybrids
(Fig. 4D). Thus, xanthophore
development is enhanced in D. albolineatus and this trait is dominant
in hybrids but highly sensitive to reduced fms activity.
Interestingly, D. choprae similarly exhibit enhanced xanthophore
development and a strong fms noncomplementation phenotype
(Fig. 2P; see Fig. S2 in
supplementary material).

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Fig. 9. Excess xanthophores in D. albolineatus compared with D.
rerio. (A-H) Xanthophores in D. rerio (A,B,F), D.
albolineatus (C,D,G), and wild-type D. rerio xD.
albolineatus hybrids (E,H). (A) In D. rerio, few xanthophores
(arrowhead) are visible during early stages of metamorphosis (stage equivalent
to Fig. 6A) and most initially
are found ventral to the horizontal myoseptum (box). Arrow indicates
iridophores in the prospective primary interstripe region. (B) During middle
stages of pigment pattern metamorphosis in D. rerio (e.g.
Fig. 6C), xanthophores occur in
the developing interstripe region (arrow) and a few faint xanthophores can be
seen along the dorsal myotomes. (C) In D. albolineatus, xanthophores
(arrowheads) are widely dispersed over the flank during early pigment pattern
metamorphosis (e.g. Fig. 6G).
(D) During later pigment pattern metamorphosis in D. albolineatus
(e.g. Fig. 6I), xanthophores
(arrowheads) persist widely scattered over the flank. Reddish erythrophores
have started to develop in the interstripe region (arrow) and persist into the
adult. Lineage relationships of erythrophores to xanthophores are unclear. (E)
In hybrids between wild-type D. rerio and D. albolineatus,
excess xanthophores (arrowheads) develop over the flank compared with D.
rerio, and reddish erythrophores develop in the interstripe region
(arrow). (F-H) Higher magnification images of larval D. rerio, D.
albolineatus, and D. rerio xD. albolineatus
hybrids shown in B-E. (I-L) In situ hybridization for early markers of the
xanthophore lineage (Parichy et al.,
2000b ; Ziegler et al.,
2000 ). Shown is GTP cyclohydrolase I (gch),
which encodes an enzyme required for synthesizing pteridine pigments of
xanthophores. Results for xanthine dehydrogenase (xdh),
encoding a second pteridine synthesis enzyme were similar (data not shown).
(I,J) D. rerio larvae; (K,L) D. albolineatus larvae. (I,K)
In both species, gch+ cells occur over the myotomes during
early metamorphosis. (J,L) At an optical plane medially within the same larvae
shown in I and K, relatively few gch+ cells are observed
in D. rerio (J), whereas many gch+ cells are
present in D. albolineatus (L). (M,N) In situ hybridization for
fms mRNA does not reveal clear differences in the numbers or
distributions of fms+ cells between D. rerio (M)
and D. albolineatus (N). Scale bars: in A, 100 µm for A,C; in B,
160 µm in B,D,E; in F, 60 µm for F-H; in I, 60 µm for I-L; in M, 80
µm for M,N.
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To further assess xanthophore development in D. albolineatus, we
examined the distributions of cells expressing molecular markers of the
xanthophore lineage. Between the epidermis and myotomes, where the adult
pigment pattern develops, precursor distributions were similar between species
(Fig. 9I,K). These data suggest
that species differences in xanthophore development reflect differences in
terminal differentiation of widely distributed precursors, rather than
differences in the abundance or patterning of precursors themselves. In medial
locations, however, precursors were more abundant in D. albolineatus
than D. rerio (Fig.
9J,L).
The many xanthophores and xanthophore precursors in D.
albolineatus suggest that fms continues to be functional in this species.
Consistent with this possibility, we could not detect differences in
fms expression between D. rerio and D. albolineatus
during or after pigment pattern metamorphosis
(Fig. 9M,N), and gross lesions
are not apparent in the fms coding sequence
(Parichy and Johnson,
2001
).
These results show that D. albolineatus develop xanthophores in
greater numbers and over a broader area than D. rerio, tending to
exclude a model in which the evolutionary loss of stripes in D.
albolineatus results simply from a loss of fms activity.
Evolutionary changes in cell-cell interactions during pigment pattern formation
The persistence of xanthophores in D. albolineatus led us to seek
other explanations for the similarity of melanophore behaviors between this
species and fms mutant D. rerio. In wild-type D.
rerio, melanophore survival and organization into stripes depends on
interactions between melanophores and fms-dependent cells of the
xanthophore lineage (Parichy and Turner,
2003a
), as well as interactions among melanophores. For example,
the D. rerio leopard gene mediates both heterotypic interactions
between melanophores and xanthophores, and homotypic interactions between
melanophores (Maderspacher and
Nusslein-Volhard, 2003
), which we refer to collectively as
`melanophore interactions'. The nature of these interactions is not yet known,
but could include direct contacts between melanophores, xanthophores, or their
precursors; alternatively, interactions could be indirect, involving secreted
signaling molecules, trophic factors, or even intermediary cell types.
Whatever their mechanism(s), the nearly uniform pigment pattern of D.
albolineaneatus with interspersed melanophores and xanthophores
(Fig. 1D; see Fig. S1C in
supplementary material) and the irregular stripes of wild-type D.
rerio xD. albolineatus hybrids (compared with other
danios, Fig. 2) resemble
different D. rerio mutant alleles of leopard
(Asai et al., 1999
), as well as
jaguar (obelix), which contribute to homotypic interactions
among melanophores (Maderspacher and
Nusslein-Volhard, 2003
). Thus, we hypothesized that instead of a
loss of xanthophores, stripe absence in D. albolineatus might reflect
changes in melanophore interactions. In principle, a species difference in
melanophore interactions could be revealed with genetic mosaics
(Parichy and Turner, 2003a
;
Quigley et al., 2004
), but
incompatibilities during early embryogenesis have so far precluded cell
transplantations between D. albolineatus and D. rerio
(D.M.P., unpublished). Thus, we used an alternative approach.
We reasoned that variation in melanophore interactions would be revealed if
melanophore numbers were reduced (by analogy with reduced xanthophores in
fms mutant D. rerio and hybrids with D.
albolineatus): with fewer melanophores, strong interactions should allow
the emergence of an organized pattern of stripes or spots, whereas weak
interactions should result in a failure to organize such pattern elements. To
achieve this, we used the D. rerio mutant,
duchamput.r19e1. A single mutant allele for
duchamp reduces melanophores in heterozygous D. rerio to
45% that of wild-type, yet the remaining melanophores form well-organized
spots (Fig. 10A,B); D.
rerio homozygous for duchamp exhibit more dispersed melanophores
(see Fig. S3 in supplementary material). We predicted that for species with
melanophore interactions equivalent to D. rerio, duchamp hybrids
should develop spots similar to heterozygous duchamp mutant D.
rerio. For species with weaker melanophore interactions than D.
rerio, tester duchamp hybrids should fail to generate organized
pattern elements and could exhibit more severe melanophore deficiencies.

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Fig. 10. Differential sensitivities across danios to melanophore reduction during
hybrid pigment pattern development. An abbreviated phylogeny is shown on the
left and wild-type danio pigment patterns are shown in A,C,E,G,I,K,M.
Representative duchamp mutant hybrids are shown in B,D,F,H,J,L,N;
schematics illustrate melanophore distributions (dorsal scale-associated
melanophores are omitted for clarity). (A,B) Heterozygous duchamp
mutant D. rerio (B) exhibit spots and fewer melanophores than wild
type (A). Xanthophore and iridophore deficits are not apparent. (C,D)
duchamp hybrids for D. kyathit develop spots of
melanophores, although these are somewhat less regular than in D.
rerio, as is the wild-type D. kyathit stripe pattern. (E,F)
duchamp hybrids for D. nigrofasciatus develop well-organized
spots or even complete stripes. (G,H) duchamp hybrids for D.
albolineatus exhibit a more severe melanophore reduction than observed in
heterozygous duchamp mutant D. rerio or other hybrids, and
these melanophores remain widely dispersed over the caudal flank. As in
duchamp mutant D. rerio, gross deficits in xanthophore
numbers were not apparent during pigment pattern metamorphosis (data not
shown). (I,J) duchamp hybrids for D. `hikari' develop
intermediate patterns, in which more melanophores are present than in D.
albolineatus hybrids, but melanophore patterns range from weak
clustering, to reticulation, to more uniform dispersion. (K-M)
duchamp hybrids for the more distantly related D. choprae
and D. dangila develop spots similar to the D. rerio species
group. Scale bars: in A, 1 mm for A-L; in M, 0.5 mm for M,N.
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Phenotypes of tester duchamp hybrids support a model in which
variation in melanophore interactions contributes to pigment pattern
differences among danios. Within the clade that includes D. rerio,
duchamp hybrids for both D. kyathit and D.
nigrofasciatus developed spots or stripes of melanophores
(Fig. 10C-F). By contrast,
duchamp hybrids for D. albolineatus failed to develop
organized spots or stripes and also had a reduction in melanophore numbers
that became increasingly severe as fish grew
(Fig. 10G,H,
Fig. 11C,D). duchamp
hybrids with D. `hikari' developed an intermediate phenotype between
D. albolineatus and other danio hybrids, in which melanophores failed
to organize into spots and remained either dispersed or in a reticulated
pattern (Fig. 10I,J). Finally,
duchamp hybrids for D. choprae and D. dangila
developed clusters of melanophores similar to D. rerio
(Fig. 10K-N,
Fig. 11A,B).

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Fig. 11. Melanophore and iridophore patterns in tester duchamp mutant
hybrids. (A,B) Different illumination of the same fields of view reveals
melanophore organization (A,C) and iridophore organization (B,D). (A,B) Tester
duchamp hybrids for D. dangila exhibit clusters of
melanophores (arrows) with iridophores (arrowheads) organized around these
clusters, as for hybrids of the D. rerio species group. (C,D) Tester
duchamp hybrids for D. albolineatus typically do not form
clusters of melanophores (arrows), and iridophores (arrowheads) are poorly
organized. Scale bars: in A, 200 µm for A,B; in C, 200 µm for C,D.
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These analyses demonstrate that hybrid pigment patterns exhibit
differential sensitivity across species to the duchamp mutant defect,
with the greatest sensitivity in D. albolineatus. These findings are
consistent with a model in which variation in melanophore interactions
contribute to pigment pattern variation among danios.
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Discussion
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Danio pigment patterns are emerging as a useful system for
understanding both the development and evolution of adult form in vertebrates.
Our study suggests a model for how evolutionary changes in pigment cell
development have generated naturally occurring variation in this ecologically
and behaviorally significant trait.
Evolution of melanophore patterning in Danio
Melanophore patterns vary markedly among danios, and our analyses
demonstrate dramatic differences in melanophore morphogenesis underlying the
uniform pattern of D. albolineatus and the striped pattern of D.
rerio. Fewer melanophores accumulate during pigment pattern metamorphosis
in D. albolineatus, largely due to increased death of melanophores
and their immediate precursors. This late block in melanophore development
resembles that seen in Astyanax cavefish
(McCauley et al., 2004
), but
contrasts with an early block affecting melanophore specification in D.
nigrofasciatus, which accounts for an equivalent total melanophore
deficit as compared with D. rerio
(Quigley et al., 2004
).
Interestingly, the mode of melanophore loss in D. albolineatus
resembles that of kit mutant D. rerio
(Parichy et al., 1999
),
raising the possibility of a difference in kit signaling between species.
Finally, we also demonstrate that D. albolineatus melanophores move
little and thus do not coalesce into distinctive stripes as in D.
rerio. In these respects, pigment pattern metamorphosis of D.
albolineatus resembles that of fms mutant D. rerio.
However, this is where the similarities end, as D. albolineatus
retain large numbers of xanthophores, in stark contrast to fms mutant
D. rerio.
We propose a model in which changes in melanophore interactions underlie
the evolutionary loss of stripes in D. albolineatus. In D.
rerio, stripe formation depends on interactions between melanophores and
fms-dependent cells of the xanthophore lineage, as well as on
interactions among melanophores; in the absence of such interactions,
initially dispersed melanophores fail to migrate into stripes and melanophore
death is increased (Maderspacher and
Nusslein-Volhard, 2003
;
Parichy and Turner, 2003a
).
Genetic analyses of D. albolineatus initially suggested that changes
in melanophore behaviors might result from a fms-dependent loss of
xanthophores. Yet, the persistence of xanthophores excludes this model.
Rather, we favor an alternative scenario involving changes in interactions
between melanophores and xanthophores, or between melanophores themselves.
This model does not exclude the possibility that differences outside of
pigment cell lineages also influence species differences in melanophore
morphogenesis, either directly, or by modulating the competence of pigment
cells to interact with one another.
Several lines of evidence support a model in which the loss of stripes in
D. albolineatus results at least partly from changes in melanophore
interactions. First, we find an interspersed arrangement of D.
albolineatus melanophores and xanthop