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Fig. 5. Changes of DNA methylation on the GFAP and STAT1 promoters when NPCs become gliogenic in control and Dnmt1–/– cells. (A) Bisulfite sequencing analysis on eight CpG sites surrounding the STAT1/3 binding elements within the mouse Gfap promoter. The percentage of methylation at each of the 8 CpG sites was plotted. (B) Bisulfite sequencing analysis shows selective demethylation occurs at the –499 CpG site but not at the –594 CpG site during 24-96 hours of culturing period of wild-type E11.5 cortical cells. (C) Methylation-specific SNuPE assay was used to independently quantify the extent of methylation at the single CpG site lying within the STAT binding element in 1- and 4-day-old cultured E12.5 control (con) and Dnmt1–/– (mut) CNS cells and in E18.5 brain samples in vivo. (D) Bisulfite sequencing analysis of eight CpG sites within the Stat1 promoter (between –731 bp and –409 bp promoter region of the gene) in E18 control and Dnmt1–/– CNS samples. (E,F). E11 control (con) or Dnmt1–/– (mut) NPCs were transfected with either a ß-gal expression vector or a CAG-promoter-Dnmt1 expression plasmid (Chen et al., 2003) within the first 24 hours of cell culturing. After an additional 4 days of culturing in the presence of LIF (50 ng/ml) to promote glial differentiation, cells were double-labeled with GFAP/ß-gal or GFAP/Dnmt1 (E) and quantified for the percentage of GFAP+/ß-gal+ or GFAP+/Dnmt1+ cells as plotted in F. Dnmt1 overexpression cells can be easily detected by the strong Dnmt1 staining signals (arrows). Two arrowheads in the control culture indicate the typical nuclear staining pattern of the endogenous Dnmt1 protein. *P<0.001 compared with control (Dnmt1+/+) with ß-gal plasmid transfection. **P<0.001 compared with Dnmt1–/– cells with ß-gal plasmid transfection (ANOVA with Post-hoc tests).





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