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First published online 3 May 2006
doi: 10.1242/dev.02399
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Center for Molecular Genetics, Division of Biological Sciences, University of California San Diego, La Jolla, CA 92093-0368, USA.
* Author for correspondence (e-mail: wloomis{at}ucsd.edu)
Accepted 7 April 2006
| SUMMARY |
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Key words: gadA, GrlE, SDF-2, Sporulation, GPCR
| INTRODUCTION |
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Proteolytic processing of AcbA to generate the signal peptide SDF-2 is
dependent on the prestalk specific ABC-protease TagC and occurs in the
intercellular space (Anjard and Loomis,
2005
). AcbA is found exclusively in prespore cells during late
development and must be released before it is processed on the surface of
prestalk cells. Prespore cells are stimulated to rapidly release AcbA when
primed with SDF-2. Likewise, SDF-2 triggers exposure of the protease activity
of TagC on prestalk cells such that AcbA can be processed. Unprimed cells do
not generate SDF-2 when presented with recombinant AcbA. Together, these
responses amplify and relay the signal. However, it is not clear what
initiates the original release of SDF-2 and the exposure of the TagC protease
domain.
Dictyostelium has been shown to produce GABA in both growing and
developing cells (Ehrenman et al.,
2004
). Two genes encoding the enzyme that converts glutamate to
GABA, glutamate decarboxylase, can be recognized in the Dictyostelium
genome. Microarray-based experiments have shown that one of these genes,
gadA, is expressed only after 10 hours of development and its mRNA
accumulates to a peak at 18 hours when the cells are initiating fruiting body
formation (Iranfar et al.,
2001
). The other gene, gadB, is expressed in growing
cells and its mRNA continuously decreases during development (Van Driessch et
al., 2002; Iranfar et al.,
2003
). GadB is likely to be responsible for the metabolism of
glutamate via the GABA shunt to succinate during growth. As gadA is
exclusively expressed in prespore cells starting at 10 hours of development,
as determined by microarray analyses and in situ hybridization
(Iranfar et al., 2001
;
Maruo et al., 2004
), GadA may
play a late developmental role. We disrupted gadA by homologous
recombination and found that the mutant cells grow and develop well, forming
normally proportioned fruiting bodies, but the number of viable spores was
reduced to about half that found in wild-type strains. As mutants lacking AcbA
or DhkA are also impaired in sporulation, the similar phenotype of
gadA cells prompted us to investigate the role of
GABA in generation of SDF-2. We found that addition of 1 nM GABA to developed
cells effectively triggered the rapid release and processing of AcbA to
generate the signal peptide SDF-2.
Signaling in the central nervous system is mediated to a large extent by
glutamate and GABA. These intercellular signals and their receptors are found
in C. elegans, Drosophila and all vertebrates but have not been found
in yeast or protists. Glutamate and GABA activate ionotrophic and metabotropic
receptors on the surface of neurons to initiate and modulate neurotransmission
and also play roles in peripheral tissues. Careful inspection of the coding
capacity of the Dictyostelium discoideum genome found that ionotropic
receptors are absent but that there are 15 genes encoding homologs of
glutamate and GABA metabotropic receptors
(Eichinger et al., 2005
;
Hereld, 2005
). Although all of
these proteins are predicted to be seven transmembrane G-protein-coupled
receptors (GPCRs), only one, GrlE, shows significant similarity in the ligand
binding domain to the GABAB family. The others show similarity in
the transmembrane and cytoplasmic G protein-binding regions but not in the
ligand-binding domain. We generated a grlE null
strain by homologous recombination and found that cells of this strain do not
produce SDF-2 in response to GABA, suggesting that GrlE is the GABA receptor
in Dictyostelium.
| MATERIALS AND METHODS |
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-aminobutyric acid), L-glutamate and cAMP were supplied by
Sigma. SDF-2 was synthesized as previously reported
(Anjard and Loomis, 2005
Cells and bioassay
The wild type strain AX4, the pkaC overexpressing strain KP and
its derivative dhkA/K, the PI3 kinase double mutant
pik1 pik2, and the
pkbR1-null mutant have been previously described
(Knecht et al., 1986
;
Anjard et al., 1992
;
Anjard et al., 1998
;
Buczynski et al., 1997
;
Meili et al., 2000
). The
acaAK strain, which lacks the G-protein-coupled
adenylyl cyclase and overexpresses pkaC has been previously
characterized (Anjard et al.,
2001
). The G
9-null strain (gpaI)
has been previously described (Brzostowski
et al., 2004
). Cells were grown in HL5 at 22°C and developed
on buffer-saturated filters or on non-nutrient agar
(Sussman, 1987
;
Anjard et al., 1998
). It was
essential to develop cells of the pik1
pik2 and pkbR1 mutant
strains on non-nutrient agar to get the majority to pass the tight aggregate
stage and proceed through morphogenesis. Fruiting bodies were washed, and
SDF-1 and SDF-2 separated using ion-exchange resins before being assayed as
previously described (Anjard et al.,
1998
).
To generate gadA null strains by homologous
recombination, a 1419 bp genomic fragment starting 276 bp after the initiation
codon of GadA was amplified by PCR and cloned in the pGEMT-EASY vector
(Promega A1360). The BSR cassette from pBSR519
(Puta and Zeng, 1998
) was
cloned into the HindIII sites of pGEMT-EASY-GadA, resulting in the
loss of 357 bp of gadA-coding sequence. For gene disruption, 10 µg
of the plasmid was linearized with NotI before electroporation into
107 AX4 cells. Gene disruption in transformants was confirmed by
PCR using primers located outside the cloned sequences.
To generate grlE-null strains by homologous recombination, a 1546
bp genomic fragment starting 178 bp before the initiation codon of GrlE was
amplified by PCR and cloned in the pGEMT-EASY vector (Promega A1360). The BSR
cassette from pBSR479 (Puta and Zeng,
1998
) was cloned in the unique BamHI restriction site of
pGEMT-EASY-GrlE. For gene disruption, 10 µg of the plasmid was linearized
with NotI before electroporation into 107 AX4 cells. Gene
disruption in transformants was confirmed by PCR using primers located outside
the cloned sequences.
The KP strain was used for the monolayer sporogenous bio-assays as
previously described (Anjard et al.,
1998
). The level of SDF-2 was determined by testing serial
dilutions in the bio-assay. The lowest effective dilution is defined as 1 unit
(Anjard et al., 1998
).
Viability was determined by plating spores after treatment with 0.5%
Triton-X100 on plates spread with bacteria. The number of plaques seen after 4
days incubation at 22°C was compared with that seen with control AX4
spores treated identically.
The efficiency of spore formation and the accumulation of SDF-2 was determined in mid-culminants collected from filters after 20 to 24 hours of development, depending on the strain. To determine the response of cells developed to mid-culmination, fruiting bodies were collected in 1 ml buffer and washed twice with 1 ml buffer. Cells (105) were then deposited into each of the wells of a six-well plate with 2 ml buffer with or without addition of 1 pM SDF-2, 10 nM GABA or 1 µM glutamate. After 10 minutes incubation, an aliquot of the supernatant was harvested to determine the amount of SDF-2 produced. An hour later the number of spores in each well was counted to determine the ratio of spores in the treated wells to that in the untreated wells.
The amount of SDF-2 produced in response to the various treatments was determined using the sporogenous assay. No SDF-2 (less than 2 units/103 cells) was detected in the supernatant of uninduced cells.
GrlE binding assay
Wild type AX4 cells and grlE cells were
developed on filters to the culmination stage, collected and washed three
times by centrifugation in 10 ml buffer containing 20 mM MES pH 6.2, 20 mM
NaCl, 20 mM KCl, 1 mM CaCl2, 1 mM MgSO4. Dissociated
cells were suspended at 107 cells/ml in cold buffer. Cell
suspension (500 µl) was incubated with 1 nM 3H-CGP 54626
(American Radiolabelled Chemical, ART 715) for 1 hour on ice in the presence
or absence of 10 µM CGP 55845. Cells from 400 µl of the suspension were
collected on GF/C glass filters (Whatman, 1822 024) using a vacuum manifold
and washed three times with 2 ml cold buffer. The amount of bound
3H-CGP 54626 on the filters was measured in a liquid scintillation
counter. Each experiment was carried out in triplicate.
Antibodies
The antibodies to AcbA have been previously described
(Anjard and Loomis, 2005
). A
1:500 dilution was added together with GABA to block SDF-2 production.
The rabbit polycolonal antibodies to the protease domain of TagC were raised to recombinant protein generated from the PCR amplified region of tagC that encodes the protease domain (S.-C. Chae and W.F.L., unpublished). The serum blocked processing of AcbA to SDF-2 after dilution of 1:2,000. Pre-immune serum did not block processing of AcbA to SDF-2 after dilution of 1:50. Antibodies were purified from the immune serum on a proteinA sepharose column before dialysis against phosphate-buffered saline.
Northern blot analyses
RNA was isolated from 108 developed cells using Trizol Reagent
(Gibco BRL). Electrophoretic separations of RNA (20 µg per sample) and
transfer to Nylon membranes (MagnaGraph) were as described by Shaulsky and
Loomis (Shaulsky and Loomis,
1993
). Probes for grlE were generated from the 979 bp
fragment of pGEMT-EASY-GrlE isolated after digestion with BamHI and
SphI. Random hexamers were used as primers for the Klenow fragment of
DNA polymerase with 150 ng of the DNA fragment to incorporate 32P
dCTP.
| RESULTS |
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The time course of appearance of SDF-2 in the supernatant was determined
following addition of 10 nM GABA to developed KP cells. The level of SDF-2 in
the buffer increased about 1000-fold in a two minute period starting 3 minutes
after the addition of GABA (Fig.
1B). Priming of cells with SDF-2 results in a burst of SDF-2
production after a delay of only 15 seconds
(Anjard et al., 1998
). As we
saw no increase in the level of SDF-2 for 3 minutes after the addition of
GABA, the subsequent sharp increase may have resulted from a priming effect of
SDF-2. As the positive feedback loop is dependent on binding of SDF-2 to its
receptor, DhkA, we could determine the effect of GABA in the absence of SDF-2
priming by carrying out the experiment in KP cells in which we had disrupted
dhkA, the gene encoding the SDF-2 receptor. Although the lag
following addition of GABA was extended to 4 minutes, GABA induced the
generation of SDF-2 in dhkA KP cells at the same
rate and to the same high level as it did in KP cells
(Fig. 1B). Thus, the
positive-feedback loop of SDF-2 is not essential for the response to GABA,
although it accelerates the response. Although dhkA
KP cells released SDF-2 in response to GABA, they were not induced to
sporulate as these cells do not have the SDF-2 receptor (data not shown).
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GrlE is the GABA receptor
The product of the grlE gene (DDB0231976) is predicted to be a
G-protein-coupled seven transmembrane receptor of family 3 GPCRs
(Hereld, 2005
). There is a
signal sequence for membrane insertion at the N terminus that is followed by a
ligand-binding domain with homology to GABAB and glutamate
metabotropic receptor domains. The seven-transmembrane region is towards the C
terminus. GABAB receptors and glutamate metabotropic receptors can
be distinguished on the basis of specific amino acids in their binding
domains. The GrlE ligand-binding domain shows higher similarity to the
GABAB receptors than to glutamate metabotropic receptors. However,
the difference in similarities is small and so its ligand specificity cannot
be predicted with confidence. Glutamate metabotropic receptors in animals have
a cysteine-rich domain that is necessary for forming stable dimers
(Kunishima et al., 2000
). This
region is missing in the GABAB receptors of animals, as well as in
GrlE. We used homologous recombination with a construct in which the
blasticidin resistance gene used for selection was inserted near the start of
grlE. We isolated two independent strains in which the size of
diagnostic PCR products indicated that the endogenous gene was replaced by the
disrupted copy (data not shown). These strains grew well and proceeded through
morphogenesis normally. However, they both produced less than a third as many
viable spores as did wild-type strains. No SDF-2 activity could be recovered
from the fruiting bodies of these strains. One of these mutants was chosen for
further study.
Cells were dissociated from wild-type and grlE-culminants and incubated in buffer in multitest wells. 10 nM GABA or 1 pM SDF-2 was added and the number of spores counted microscopically 1 hour later. The number of spores in the wild type strain AX4 was induced over threefold by either GABA or SDF-2 relative to the level seen in the absence of inducers (Fig. 2). However, there was no significant induction of sporulation by GABA in the grlE cells. However, these cells responded to SDF-2 normally (Fig. 2). It appears that cells lacking GrlE do not respond to GABA by generating SDF-2, although they respond to SDF-2 when it is added exogenously.
|
To determine the specificity of the response to glutamate and GABA, we tested aspartate, arginine, glutamine, methionine or serine to see if they would either induce rapid sporulation or inhibit induction by GABA or SDF-2. Even when added at 5 mM these compounds had no significant effects on spontaneous sporulation or the response to either GABA or SDF-2 (data not shown).
To confirm that GrlE is the GABA receptor, we used the high-affinity GABA
antagonists CPG 54626 and CGP 55845, which have been shown to be specific for
GABAB receptors (Davies et al.,
1993
). The affinity of mammalian GABA-B receptors for these
compounds is tenfold higher than it is for GABA facilitating binding assays.
We incubated 1 nM 3H-CGP 54626 with 5x106 cells
dissociated from culminants of either the wild-type strain or the
grlE mutant strain for an hour at 0°C and then
collected them on filters. Non-specific binding was measured by adding
10,000-fold excess unlabelled CGP55845
(Table 3). We found that
wild-type cells would specifically bind 110 fmoles CGP4626, while
grlE mutant cells bound only 15 fmoles, which is
within the error margin of the assay.
|
|
To follow the signal transduction pathway further, we tested several other compounds known to inhibit specifically common downstream components. We found that both CGP55845 and CGP54626, competitive inhibitors of GABAB receptors, blocked the generation of SDF-2 in response to either SDF-2 or GABA (Table 4). LY294002, an inhibitor of PI3 kinases, as well as AKT inhibitor IV, an inhibitor of the PKB-related protein kinases, blocked induction of SDF-2 production by GABA but had no effect on induction by SDF-2 itself (Table 4). Thus, it is likely that PI3K and PKB-R1 act downstream of GrlE. We also tested AKT inhibitor VIII, which is targeted to the PH domain of AKT, and H89 which inhibits PKA. Neither of these compounds had any measureable effect, suggesting that the GABA signal transduction does not involve the classical AKT or PKA. Addition of 1 µM glutamate inhibited SDF-2 production in response to either GABA or SDF-2, even in the presence of LY294002 or the Akt inhibitors (Table 4). Although these results are not surprising for cells primed with GABA, as glutamate is a competitive inhibitor of GABA, they indicate that the pathway by which glutamate inhibits SDF-2 priming is independent of PI3 kinases or PKB-R1.
|
|
There is no measurable SDF-2 in fruiting bodies of grlE cells, indicating that the GABA receptor is necessary for SDF-2 production during development. SDF-2 is not generated by cells dissociated from grlE culminants after treatment with GABA, although they respond normally to added SDF-2. As shown in Fig. 2, glutamate does not block induction of sporulation by SDF-2 in this strain.
As expected, acbA cells, which cannot make the precursor of SDF-2, do not have measurable SDF-2 in their fruiting bodies and do not generate SDF-2 upon priming by either SDF-2 or GABA (Table 3). However, they can generate SDF-2 if provided with recombinant AcbA, as long as they are primed by GABA or SDF-2 (data not shown). The pik1 2 and pkbR1 mutants also do not contain SDF-2 in their fruiting bodies, although they can respond to added SDF-2 by producing high levels of SDF-2. GABA does not induce SDF-2 generation in these strains (Table 3). As expected from the lack of inhibition by H89, cells lacking the G protein-coupled adenylyl cyclase, AcaA, that overexpress pkaC responded normally to GABA and SDF-2 (Table 4).
Glutamate inhibited SDF-2 production in response to either GABA or SDF-2 in
each of the strains except the one lacking the GABA/glutamate receptor GrlE
(Table 4). This strain responds
to SDF-2 but not to GABA by production of SDF-2
(Table 4). These results
confirm that glutamate inhibits SDF-2 production in response to SDF-2 by a
pathway that is independent of either PI3 kinase or PKB-R1. The observation
that glutamate did not inhibit SDF-2 production in response to SDF-2 in the
strain lacking G
9, while GABA still induced SDF-2 in this strain
(Table 4), further indicates
that the signal transduction pathways for GABA and glutamate are separate
although both require the GrlE receptor.
| DISCUSSION |
|---|
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Production of GABA by glutamate decarboxylase late in development appears
to be essential for accumulation of SDF-2 as fruiting bodies of
gadA strains are devoid of SDF-2
(Table 4). The requirement for
GABA signaling to initiate SDF-2 production is further supported by our
observation that SDF-2 is also missing from the fruiting bodies of
grlE mutant strains that lack the GABA receptor.
The fact that these strains are able to complete terminal differentiation and
make spores at all is probably due to the other peptide signal, SDF-1, which
also induces encapsulation (Anjard et al.,
1997
). Fruiting bodies of gadA and
grlE mutants that lack SDF-2 were shown to have
normal levels of SDF-1 (data not shown).
The GABA receptor, GrlE, is a seven transmembrane G-protein-coupled receptor in which the ligand-binding domain is similar to those of the GABAB family but also shows some similarity to the ligand-binding domains of metabotropic glutamate receptors. In fact, both GABA and glutamate appear to bind to GrlE. Glutamate acts as a competitive inhibitor of GABA and can block the ability of GABA to induce rapid encapsulation if present at 100-fold higher concentrations than GABA. Moreover, 100 nM glutamate blocks the induction of sporulation by SDF-2. This inhibitory response is missing in grlE-null cells showing that it is mediated through the GrlE receptor (Fig. 2). The GrlE receptor is not necessary for the cells to respond to SDF-2 by rapid encapsulation indicating that it does not directly interact with the SDF-2 receptor DhkA. The GABAB specific inhibitors CGP55845 and CGP5426 are effective inhibitors of GrlE (Table 4), indicating that the binding site is similar to the GABAB-binding site.
Signal transduction pathways from GPCRs often result in activation of
adenylyl cyclase, such that PKA activity increases. Although the PKA inhibitor
H-89 blocked the production of SDF-2 in response to SDF-2 priming as
previously reported (Anjard et al.,
1998
), it did not inhibit production of SDF-2 in response to GABA
(Table 3). Although PKA plays a
myriad of roles in development of Dictyostelium, it does not seem to
be involved in signal transduction from GrlE. Moreover, we found that cells
lacking adenylyl cyclase but overexpressing PKA
(acaA K) respond to both GABA and SDF-2 by rapidly
producing high levels of SDF-2 (Table
4). The fact that they respond to GABA normally indicates that
activation of adenylyl cyclase is not necessary for the signal transduction
pathway leading to SDF-2.
Some GPCRs are coupled to phospholipase C and use diacylglycerol and
IP3 as a second messengers (van
Dijken et al., 1997
; Rhee,
2001
). We treated the cells with 6 µM U73122, a drug that has
been shown to block phospholipase C in Dictyostelium (Lyden and
Cotter, 1995; Seastone et al.,
1999
), and found that it had no effect on the ability of GABA to
induce rapid production of SDF-2 (data not shown). It appears that PLC is not
part of the GrlE signal transduction pathway.
PI3kinase and Akt/PKB are also frequently found in signal transduction
pathways downstream of GPCRs (Meili et
al., 1999
; Meili et al.,
2000
; Manahan et al.,
2004
; Sasaki et al.,
2004
). We tested the PI3 kinase inhibitor LY294002 and Akt
inhibitor IV and found that addition of either drug at 1 µM completely
blocked the response to GABA that results in generation of SDF-2. Akt
inhibitor IV is targeted to the kinase which activates PKB and PKB-related
proteins. However, Akt inhibitor VIII, which is targeted to the PH domain of
Akt, had no observable effect. The post-aggregation PKB-related kinase, PkbR1,
unlike the aggregation stage Akt1, does not carry a PH domain
(Meili et al., 2000
).
Therefore, we determined whether a strain lacking PKB-R1 would respond to
SDF-2 priming or GABA priming. We found that the pkbR1-null strain
failed to produce SDF-2 when primed by GABA, although it responded normally to
SDF-2. As expected, a strain in which the two major PI3 kinase genes,
pik1 and pik2, were disrupted failed to respond to GABA.
Neither the pik1 pik2
double mutant nor the pkbR1-null strain accumulated any measurable
SDF-2 in their fruiting bodies, once again showing that GABA signaling is
essential for SDF-2 production (Table
4). Although we cannot rule out that PI3kinase and PKB R1 might
function in parallel to induce AcbA release, it has previously been shown that
these enzymes act in a linear pathway at an earlier stage of development in
Dictyostelium (Meili et al.,
1999
; Meili et al.,
2000
; Manahan et al.,
2004
; Sasaki et al.,
2004
). Therefore, we suggest that when GABA binds to GrlE, PI3
kinases are activated leading indirectly to activation of PKB-R1 and
triggering release of AcbA from prespore cells
(Fig. 5).
Once AcbA is released, it is rapidly processed into SDF-2 in a process that is dependent on the prestalk specific ABC-protease TagC. In the absence of priming, there is no processing of recombinant AcbA into SDF-2. Cells in which the tagC gene is disrupted are unable to process recombinant AcbA into SDF-2. Likewise, primed cells treated with antibodies to the protease domain of TagC are unable to process AcbA into SDF-2, even when free antibody is washed away (Table 2). However, the TagC protease epitope is not exposed before priming, as shown by the fact that antibodies to it do not block the activity if they are washed out before priming and the cells presented with recombinant AcbA. It appears that signaling by either GABA or SDF-2 results in the presentation of the TagC protease on the surface where it can process AcbA. The protease domain is followed by an ABC domain in TagC and inhibitors of the ABC transport function block exposure of the protease domain (Table 1). The six-transmembrane ABC domain may be directly involved in the presentation of the attached protease domain on the cell surface.
|
9 indicates that
GrlE is coupled to a trimeric G protein with this specific subunit. However,
GABA induced SDF-2 production normally in the strain lacking G
9 showing
that GrlE is not obligatorily coupled to this G protein. It appears that GrlE
interacts with two different trimeric G proteins, depending on which ligand is
bound, and that one stimulates the PI3 kinase pathway while the other does
not. To account for the fact that glutamate can inhibit the ability of the
SDF-2 to act through its receptor histidine kinase DhkA and cause release of
AcbA, we would have to consider a separate inhibitory pathway that functions
when glutamate binds to GrlE (Fig.
5).
GABAB receptors in mammalian cells are heterodimers formed from
two highly related transmembrane proteins, only one of which binds GABA
(Kniazeff et al., 2002
). The
other subunit is responsible for transducing the signal within the cell.
However, mammalian metabotropic glutamate receptors function as homodimers
(Kniazeff et al., 2004
;
Tateyama et al., 2004
). GrlE
may function as a monomer, a homodimer or a heterodimer in
Dictyostelium. There are many potential partners for GrlE; the
Dictyostelium genome encodes 14 other family 3 GPCRs
(Eichinger et al., 2005
;
Hereld, 2005
). However, none
of them have regions similar to the ligand binding domain of GrlE.
Nevertheless, if they work in the same way as the GB2 subunit of mammalian
GABAB receptors, they would not be expected to bind GABA.
Systematic study of these genes may uncover an interacting partner.
| ACKNOWLEDGMENTS |
|---|
9-mutant strain. This work was
supported by a grant from NIH (GM078175). | REFERENCES |
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