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Fig. 2. neverland is conserved among several animal species. (A)
Predicted polypeptides that are produced from nvd-Bm (Bombyx
mori) (GenBank Accession Number AB232986) and its closest relatives from
Drosophila melanogaster (AB232987), Anopheles gambiae
(XP_309236.1), Caenorhabditis elegans (NP_505629), Ciona
intestinalis (EST clones cicl031b24 and cicl077j15 from the
Ciona cDNA database;
http://ghost.zool.kyoto-u.ac.jp/cgi-bin/getblast1.cgi),
Danio rerio (NP_001002612), Gallus gallus (XP_425346),
Rhodococcus erythropolis (kshA gene, AAL96829) and
Pseudomonas fluorescens (prnD gene, U74493). These
polypeptides share a Rieske domain (dark gray) and a highly conserved domain
in the C-terminal region (light gray). The bars above each domain indicate the
positions of the [2Fe-2S] binding motif
(C-X-H-X16-17-C-X2-H) and the non-heme iron-binding
motif [Fe(II); E-X3-D-X2-H-X4-H]. Percentages
represent amino acid identities between each domain of nvd-Bm and
that of others. Also indicated are the total numbers of residues for
individual proteins. The Anopheles and Ciona orthologs are
incompletely predicted on both ends. A black box indicates the transmembrane
domain predicted by TMHMM software
(http://www.cbs.dtu.dk/services/TMHMM/).
(B) Sequence alignment of the Rieske motif and the non-heme
iron-binding motif of Nvd-Bm with its closest relatives. Identical residues in
all nine species are white on black, while identical residues in five or more
species are boxed. The evolutionally conserved amino acids of the Rieske
domain and non-heme iron binding motif are indicated above the alignment.