Analysis of an even-skipped rescue transgene reveals both composite and discrete neuronal and early blastoderm enhancers, and multi-stripe positioning by gap gene repressor gradients

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Ahringer, J (1996). Posterior patterning by the Caenorhabditis elegans even-skipped homolog vab-7. Genes Dev 10, 1120-1130.[Abstract/Free Full Text]

Bastian, H. and Gruss, P (1990). A murine even-skipped homologue, Evx-1 , is expressed during early embryogenesis and neurogenesis in a biphasic manner. EMBO J 9, 1839-1852.[Medline]

Bodmer, R (1993). The gene tinman is required for specification of the heart and visceral muscles in Drosophila. Development 118, 719-729.[Abstract]

Bossing, T., Udolph, G., Doe, C. Q. and Technau, G. M (1996). The embryonic central nervous system lineages of Drosophila melanogaster . I. Neuroblast lineages derived from the ventral half of the neuroectoderm. Dev. Biol 179, 41-64.[Medline]

Broadus, J., Skeath, J. B., Spana, E. P., Bossing, T., Technau, G. and Doe, C. Q (1995). New neuroblast markers and the origin of the aCC/pCC neurons in the Drosophila central nervous system. Mech. Dev 53, 393-402.[Medline]

Bronner, G. and J\212ckle, H (1991). Control and function of terminal gap gene activity in the posterior pole region of the Drosophila embryo. Mech. Dev 35, 205-11.[Medline]

Brown, J. L., Mucci, D., Whiteley, M., Dirksen, M. L. and Kassis, J. A (1998). The Drosophila Polycomb Group Gene pleiohomeotic Encodes a DNA Binding Protein With Homology to the Transcription Factor YY1. Molecular Cell 1, 1057-1064.

Brown, S. J., Parrish, J. K., Beeman, R. W. and Denell, R. E (1997). Molecular characterization and embryonic expression of the even-skipped ortholog of Tribolium castaneum. Mech. Dev 61, 165-73.[Medline]

DeCamillis, M., Cheng, N. S., Pierre, D. and Brock, H. W (1992). The polyhomeotic gene of Drosophila encodes a chromatin protein that shares polytene chromosome-binding sites with Polycomb. Genes Dev 6, 223-32.[Abstract/Free Full Text]

Doe, C. Q., Smouse, D. and Goodman, C. S (1988). Control of neuronal fate by the Drosophila segmentation gene even-skipped. Nature 333, 376-378.[Medline]

Dush, M. K. and Martin, G. R (1992). Analysis of mouse Evx genes: Evx-1 displays graded expression in the primitive streak. Dev. Biol 151, 273-287.[Medline]

Eldon, E. D. and Pirrotta, V (1991). Interactions of the Drosophila gap gene giant with maternal and zygotic pattern-forming genes. Development 111, 367-78.[Abstract]

Ellis, M. C., O'Neill, E. M. and Rubin, G. M (1993). Expression of Drosophilaglass protein and evidence for negative regulation of its activity in non-neuronal cells by another DNA-binding protein. Development 119, 855-65.[Abstract/Free Full Text]

Frasch, M., Hoey, T., Rushlow, C., Doyle, H. and Levine, M (1987). Characterization and localization of the even-skipped protein of Drosophila. EMBO J 6, 749-59.[Medline]

Frasch, M. and Levine, M (1987). Complementary patterns of even-skipped and fushi tarazu expression involve their differential regulation by a common set of segmentation genes in Drosophila. Genes Dev 1, 981-95.[Abstract/Free Full Text]

Frasch, M., Warrior, R., Tugwood, J. and Levine, M (1988). Molecular analysis of even-skipped mutants in Drosophila development. Genes Dev 2, 1824-38.[Abstract/Free Full Text]

Fujioka, M., Jaynes, J. B. and Goto, T (1995). Early even-skipped stripes act as morphogenetic gradients at the single cell level to establish engrailed expression. Development 121, 4371-4382.[Abstract]

Fujioka, M., Miskiewicz, P., Raj, L., Gulledge, A. A., Weir, M. and Goto, T (1996). Drosophila Paired regulates late even-skipped expression through a composite binding site for the paired domain and the homeodomain. Development 122, 2697-2707.[Abstract]

Gaul, U. and J\212ckle, H (1987). How to fill a gap in the Drosophila embryo. Trends Genet 3, 127-131.

Goto, T., Macdonald, P. and Maniatis, T (1989). Early and late periodic patterns of even-skipped expression are controlled by distinct regulatory elements that respond to different spatial cues. Cell 57, 413-422.[Medline]

Han, K. and Manley, J. L (1993). Transcriptional repression by the Drosophilaeven-skipped protein: definition of a minimal repression domain. Genes Dev 7, 491-503.[Abstract/Free Full Text]

Hou, X. S., Melnick, M. B. and Perrimon, N (1996). marelle acts downstream of the Drosophila HOP/JAK kinase and encodes a protein similar to the mammalian STATs. Cell 84, 411-9.[Medline]

Hulskamp, M., Pfeifle, C. and Tautz, D (1990). A morphogenetic gradient of hunchback protein organizes the expression of the gap genes Kruppel and knirps in the early Drosophila embryo. Nature 346, 577-580.[Medline]

Ingham, P. W., Baker, N. E. and Martinez, A. A (1988). Regulation of segment polarity genes in the Drosophila blastoderm by fushi tarazu and even-skipped. Nature 331, 73-5.[Medline]

Irvine, K. D. and Wieschaus, E (1994). Cell intercalation during Drosophila germ band extension and its regulation by pair-rule segmentation genes. Development 120, 827-41.[Abstract]

Joly, J. S., Joly, C., Schulte-Merker, S., Boulekbache, H. and Condamine, H (1993). The ventral and posterior expression of the zebrafish homeobox gene eve1 is perturbed in dorsalized and mutant embryos. Development 119, 1261-1275.[Abstract]

Kosman, D. and Small, S (1997). Concentration-dependent patterning by an ectopic expression domain of the Drosophila gap gene knirps. Development 124, 1343-54.[Abstract]

Kraut, R. and Levine, M (1991). Spatial regulation of the gap gene giant during Drosophila development. Development 111, 601-609.[Abstract]

Kraut, R. and Levine, M (1991). Mutually repressive interactions between the gap genes giant and Kruppel define middle body regions of the Drosophila embryo. Development 111, 611-621.[Abstract]

Lawrence, P. A., Johnston, P., Macdonald, P. and Struhl, G (1987). Borders of parasegments in Drosophila embryos are delimited by the fushi tarazu and even-skipped genes. Nature 328, 440-2.[Medline]

Ludwig, M. Z. and Kreitman, M (1995). Evolutionary dynamics of the enhancer region of even-skipped in Drosophila. Molecular Biology & Evolution 12, 1002-11.[Abstract]

Ludwig, M. Z., Patel, N. H. and Kreitman, M (1998). Functional analysis of eve stripe 2 enhancer evolution in Drosophila : rules governing conservation and change. Development 125, 949-58.[Abstract]

Ma, Y., Niemitz, E. L., Nambu, P. A., Shan, X., Sackerson, C., Fujioka, M., Goto, T. and Nambu, J. R (1998). Gene regulatory functions of Drosophila Fish-hook, a high mobility group domain Sox protein. Mech. Dev 73, 169-182.[Medline]

Macdonald, P. M., Ingham, P. and Struhl, G (1986). Isolation, structure, and expression of even-skipped : a second pair-rule gene of Drosophila containing a homeo box. Cell 47, 721-734.[Medline]

Mullen, J. R. and DiNardo, S (1995). Establishing parasegments in Drosophila embryos: roles of the odd-skipped and naked genes. Dev. Biol 169, 295-308.[Medline]

Nambu, P. A. and Nambu, J. R (1996). The Drosophilafish-hook gene encodes a HMG domain protein essential for segmentation and CNS development. Development 122, 3467-75.[Abstract]

Nusslein-Volhard, C., Kluding, H. and Jurgens, G (1985). Genes affecting the segmental subdivision of the Drosophila embryo. Cold Spring Harbor Symposia On Quantitative Biology 50, 145-154.[Medline]

O'Brien, M. A., Roberts, M. S. and Taghert, P. H (1994). A genetic and molecular analysis of the 46C chromosomal region surrounding the FMRFamide neuropeptide gene in Drosophilamelanogaster. Genetics 137, 121-37.[Abstract]

Pankratz, M. J., Hoch, M., Seifert, E. and J\212ckle, H (1989). Kruppel requirement for knirps enhancement reflects overlapping gap gene activities in the Drosophila embryo. Nature 341, 337-40.[Medline]

Patel, N. H., Ball, E. E. and Goodman, C. S (1992). Changing role of even-skipped during the evolution of insect pattern formation. Nature 357, 339-42.[Medline]

Patel, N. H., Condron, B. G. and Zinn, K (1994). Pair-rule expression patterns of even-skipped are found in both short-and long-germ beetles. Nature 367, 429-34.[Medline]

Patel, N. H., Schafer, B., Goodman, C. S. and Holmgren, R (1989). The role of segment polarity genes during Drosophila neurogenesis. Genes Dev 3, 890-904.[Abstract/Free Full Text]

Reinitz, J. and Sharp, D. H (1995). Mechanism of eve stripe formation. Mech. Dev 49, 133-158.[Medline]

Rubin, G. M. and Spradling, A. C (1982). Genetic transformation of Drosophila with transposable element vectors. Science 218, 348-53.[Abstract/Free Full Text]

Russell, S. R., Sanchez-Soriano, N., Wright, C. R. and Ashburner, M (1996). The Dichaete gene of Drosophilamelanogaster encodes a SOX-domain protein required for embryonic segmentation. Development 122, 3669-76.[Abstract]

Sackerson, C (1995). Patterns of conservation and divergence at the even-skipped locus of Drosophila. Mech. Dev 51, 199-215.[Medline]

Sato, T. and Denell, R. E (1986). Segmental identity of caudal cuticular features of Drosophila melanogaster larvae and its control by the bithorax complex. Dev. Biol 116, 78-91.

Small, S., Blair, A. and Levine, M (1992). Regulation of even-skipped stripe 2 in the Drosophila embryo. EMBO J 11, 4047-4057.[Medline]

Small, S., Blair, A. and Levine, M (1996). Regulation of two pair-rule stripes by a single enhancer in the Drosophila embryo. Dev. Biol 175, 314-24.[Medline]

Small, S., Kraut, R., Hoey, T., Warrior, R. and Levine, M (1991). Transcriptional regulation of a pair-rule stripe in Drosophila. Genes Dev 5, 827-839.[Abstract/Free Full Text]

Stanojevic, D., Hoey, T. and Levine, M (1989). Sequence-specific DNA-binding activities of the gap proteins encoded by hunchback and Kruppel in Drosophila. Nature 341, 331-5.[Medline]

Stanojevic, D., Small, S. and Levine, M (1991). Regulation of a segmentation stripe by overlapping activators and repressors in the Drosophila embryo. Science 254, 1385-1387.[Abstract/Free Full Text]

Tautz, D. and Pfeifle, C (1989). A non-radioactive in situ hybridization method for the localization of specific RNAs in Drosophila embryos reveals translational control of the segmentation gene hunchback. Chromosoma 98, 81-5.[Medline]

Vincent, A., Blankenship, J. T. and Wieschaus, E (1997). Integration of the head and trunk segmentation systems controls cephalic furrow formation in Drosophila. Development 124, 3747-3754.[Abstract]

Weigmann, K. and Lehner, C. F (1995). Cell fate specification by even-skipped expression in the Drosophila nervous system is coupled to cell cycle progression. Development 121, 3713-21.[Abstract]

Wu, X., Vakani, R. and Small, S (1998). Two distinct mechanisms for differential positioning of gene expression borders involving the Drosophila gap protein giant. Development 125, 3765-3774.[Abstract]

Yan, R., Small, S., Desplan, C., Dearolf, C. R. and Darnell, J. E., Jr (1996). Identification of a Stat gene that functions in Drosophila development. Cell 84, 421-30.[Medline]

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				D. Papatsenko, Y. Goltsev, and M. Levine Organization of developmental enhancers in the Drosophila embryo Nucleic Acids Res., September 1, 2009; 37(17): 5665 - 5677. [Abstract] [Full Text] [PDF]

				M. Fujioka, G. L. Yusibova, J. Zhou, and J. B. Jaynes The DNA-binding Polycomb-group protein Pleiohomeotic maintains both active and repressed transcriptional states through a single site Development, December 15, 2008; 135(24): 4131 - 4139. [Abstract] [Full Text] [PDF]

				L.-C. Yao, S. Phin, J. Cho, C. Rushlow, K. Arora, and R. Warrior Multiple modular promoter elements drive graded brinker expression in response to the Dpp morphogen gradient Development, June 15, 2008; 135(12): 2183 - 2192. [Abstract] [Full Text] [PDF]

				N. I. Muraro, A. J. Weston, A. P. Gerber, S. Luschnig, K. G. Moffat, and R. A. Baines Pumilio Binds para mRNA and Requires Nanos and Brat to Regulate Sodium Current in Drosophila Motoneurons J. Neurosci., February 27, 2008; 28(9): 2099 - 2109. [Abstract] [Full Text] [PDF]

				D. Papatsenko and M. S. Levine Dual regulation by the Hunchback gradient in the Drosophila embryo PNAS, February 26, 2008; 105(8): 2901 - 2906. [Abstract] [Full Text] [PDF]

				P. Struffi and D. N. Arnosti Functional Interaction between the Drosophila Knirps Short Range Transcriptional Repressor and RPD3 Histone Deacetylase J. Biol. Chem., December 9, 2005; 280(49): 40757 - 40765. [Abstract] [Full Text] [PDF]

				M. Fujioka, R. J. Wessells, Z. Han, J. Liu, K. Fitzgerald, G. L. Yusibova, M. Zamora, P. Ruiz-Lozano, R. Bodmer, and J. B. Jaynes Embryonic even skipped-Dependent Muscle and Heart Cell Fates Are Required for Normal Adult Activity, Heart Function, and Lifespan Circ. Res., November 25, 2005; 97(11): 1108 - 1114. [Abstract] [Full Text] [PDF]

				J. L. Brown, D. J. Grau, S. K. DeVido, and J. A. Kassis An Sp1/KLF binding site is important for the activity of a Polycomb group response element from the Drosophila engrailed gene Nucleic Acids Res., September 9, 2005; 33(16): 5181 - 5189. [Abstract] [Full Text] [PDF]

				M. A. Pultz, L. Westendorf, S. D. Gale, K. Hawkins, J. Lynch, J. N. Pitt, N. L. Reeves, J. C. Y. Yao, S. Small, C. Desplan, et al. A major role for zygotic hunchback in patterning the Nasonia embryo Development, August 15, 2005; 132(16): 3705 - 3715. [Abstract] [Full Text] [PDF]

				M. M. Kulkarni and D. N. Arnosti cis-Regulatory Logic of Short-Range Transcriptional Repression in Drosophila melanogaster Mol. Cell. Biol., May 1, 2005; 25(9): 3411 - 3420. [Abstract] [Full Text] [PDF]

				A. Ochoa-Espinosa, G. Yucel, L. Kaplan, A. Pare, N. Pura, A. Oberstein, D. Papatsenko, and S. Small Gene Regulatory Networks Special Feature: The role of binding site cluster strength in Bicoid-dependent patterning in Drosophila PNAS, April 5, 2005; 102(14): 4960 - 4965. [Abstract] [Full Text] [PDF]

				N. Sanchez-Soriano and A. Prokop The Influence of Pioneer Neurons on a Growing Motor Nerve in Drosophila Requires the Neural Cell Adhesion Molecule Homolog FasciclinII J. Neurosci., January 5, 2005; 25(1): 78 - 87. [Abstract] [Full Text] [PDF]

				H. T. Broihier, A. Kuzin, Y. Zhu, W. Odenwald, and J. B. Skeath Drosophila homeodomain protein Nkx6 coordinates motoneuron subtype identity and axonogenesis Development, November 1, 2004; 131(21): 5233 - 5242. [Abstract] [Full Text] [PDF]

				C. J. Mee, E. C. G. Pym, K. G. Moffat, and R. A. Baines Regulation of Neuronal Excitability through Pumilio-Dependent Control of a Sodium Channel Gene J. Neurosci., October 6, 2004; 24(40): 8695 - 8703. [Abstract] [Full Text] [PDF]

				R. A. Baines Synaptic Strengthening Mediated by Bone Morphogenetic Protein-Dependent Retrograde Signaling in the Drosophila CNS J. Neurosci., August 4, 2004; 24(31): 6904 - 6911. [Abstract] [Full Text] [PDF]

				A. Matyash, H.-R. Chung, and H. Jackle Genome-wide Mapping of in Vivo Targets of the Drosophila Transcription Factor Kruppel J. Biol. Chem., July 16, 2004; 279(29): 30689 - 30696. [Abstract] [Full Text] [PDF]

				P. Struffi, M. Corado, M. Kulkarni, and D. N. Arnosti Quantitative contributions of CtBP-dependent and -independent repression activities of Knirps Development, May 15, 2004; 131(10): 2419 - 2429. [Abstract] [Full Text] [PDF]

				M. M. Kulkarni and D. N. Arnosti Information display by transcriptional enhancers Development, December 29, 2003; 130(26): 6569 - 6575. [Abstract] [Full Text] [PDF]

				M. Fujioka, B. C. Lear, M. Landgraf, G. L. Yusibova, J. Zhou, K. M. Riley, N. H. Patel, and J. B. Jaynes Even-skipped, acting as a repressor, regulates axonal projections in Drosophila Development, November 15, 2003; 130(22): 5385 - 5400. [Abstract] [Full Text] [PDF]

				R. A. Baines Postsynaptic Protein Kinase A Reduces Neuronal Excitability in Response to Increased Synaptic Excitation in the Drosophila CNS J. Neurosci., September 24, 2003; 23(25): 8664 - 8672. [Abstract] [Full Text] [PDF]

				J.-R. Ryu and D. N. Arnosti Functional similarity of Knirps CtBP-dependent and CtBP-independent transcriptional repressor activities Nucleic Acids Res., August 1, 2003; 31(15): 4654 - 4662. [Abstract] [Full Text] [PDF]

				A. P. Lifanov, V. J. Makeev, A. G. Nazina, and D. A. Papatsenko Homotypic Regulatory Clusters in Drosophila Genome Res., April 1, 2003; 13(4): 579 - 588. [Abstract] [Full Text] [PDF]

				M. Kobayashi, M. Fujioka, E. N. Tolkunova, D. Deka, M. Abu-Shaar, R. S. Mann, and J. B. Jaynes Engrailed cooperates with extradenticle and homothorax to repress target genes in Drosophila Development, February 15, 2003; 130(4): 741 - 751. [Abstract] [Full Text] [PDF]

				R. A. Baines, L. Seugnet, A. Thompson, P. M. Salvaterra, and M. Bate Regulation of Synaptic Connectivity: Levels of Fasciclin II Influence Synaptic Growth in the Drosophila CNS J. Neurosci., August 1, 2002; 22(15): 6587 - 6595. [Abstract] [Full Text] [PDF]

				J. Americo, M. Whiteley, J. L. Brown, M. Fujioka, J. B. Jaynes, and J. A. Kassis A Complex Array of DNA-Binding Proteins Required for Pairing-Sensitive Silencing by a Polycomb Group Response Element From the Drosophila engrailed Gene Genetics, April 1, 2002; 160(4): 1561 - 1571. [Abstract] [Full Text] [PDF]

				B. P. Berman, Y. Nibu, B. D. Pfeiffer, P. Tomancak, S. E. Celniker, M. Levine, G. M. Rubin, and M. B. Eisen Exploiting transcription factor binding site clustering to identify cis-regulatory modules involved in pattern formation in the Drosophila genome PNAS, January 22, 2002; 99(2): 757 - 762. [Abstract] [Full Text] [PDF]

				L. P. M. Andrioli, V. Vasisht, E. Theodosopoulou, A. Oberstein, and S. Small Anterior repression of a Drosophila stripe enhancer requires three position-specific mechanisms Development, January 11, 2002; 129(21): 4931 - 4940. [Abstract] [Full Text] [PDF]

				M. Fujioka, G. L. Yusibova, N. H. Patel, S. J. Brown, and J. B. Jaynes The repressor activity of Even-skipped is highly conserved, and is sufficient to activate engrailed and to regulate both the spacing and stability of parasegment boundaries Development, January 10, 2002; 129(19): 4411 - 4421. [Abstract] [Full Text] [PDF]

				R. A. Baines, J. P. Uhler, A. Thompson, S. T. Sweeney, and M. Bate Altered Electrical Properties in Drosophila Neurons Developing without Synaptic Transmission J. Neurosci., March 1, 2001; 21(5): 1523 - 1531. [Abstract] [Full Text] [PDF]

				M Kobayashi, R. Goldstein, M Fujioka, Z Paroush, and J. Jaynes Groucho augments the repression of multiple Even skipped target genes in establishing parasegment boundaries Development, January 5, 2001; 128(10): 1805 - 1815. [Abstract] [PDF]