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RESEARCH ARTICLE
The Xenopus primordial germ cell transcriptome identifies sox7: a novel role in early PGC development
Amanda M. Butler, Dawn A. Owens, Lingyu Wang, Mary Lou King
Development 2017 : dev.155978 doi: 10.1242/dev.155978 Published 20 November 2017
Amanda M. Butler
Department of Cell Biology, University of Miami Miller School of Medicine, 1011 NW 15th St, Miami, FL 33136, USA
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Dawn A. Owens
Department of Cell Biology, University of Miami Miller School of Medicine, 1011 NW 15th St, Miami, FL 33136, USA
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Lingyu Wang
Department of Biology, University of Miami, Coral Gables, FL 33124, USA
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Mary Lou King
Department of Cell Biology, University of Miami Miller School of Medicine, 1011 NW 15th St, Miami, FL 33136, USA
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  • ORCID record for Mary Lou King
  • For correspondence: mking@med.miami.edu
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Abstract

Xenopus primordial germ cells (PGCs) are determined by the presence of maternally derived germ plasm. Germ plasm components both protect PGCs from somatic differentiation and begin a unique gene expression program. Segregation of the germline from the endodermal lineage occurs during gastrulation, and PGCs subsequently initiate zygotic transcription. However, the gene-network(s) that operate to both preserve and promote germline differentiation are poorly understood. Here, we utilized RNA-sequencing analysis to comprehensively interrogate PGC and neighboring endoderm cell mRNAs after lineage segregation. We identified 1,865 transcripts enriched in PGCs compared to endoderm cells. We next compared the PGC-enriched transcripts to previously identified maternal, vegetally-enriched transcripts, and found that >50% of maternal transcripts were enriched in PGCs, including sox7. PGC-directed sox7 knockdown and over-expression studies revealed an early requirement for sox7 in germ plasm localization, zygotic transcription, and PGC number. We identified oct60 as the most highly expressed and enriched OCT3/4 homologue in PGCs. We compared the Xenopus PGC transcriptome with human PGC transcripts and showed that 80% of genes are conserved, underscoring the usefulness of Xenopus for human based studies.

  • Received June 13, 2017.
  • Accepted November 6, 2017.
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Keywords

  • Xenopus
  • RNA-seq
  • PGCs
  • SOX7
  • oct60
  • Germ plasm

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The Xenopus primordial germ cell transcriptome identifies sox7: a novel role in early PGC development
Amanda M. Butler, Dawn A. Owens, Lingyu Wang, Mary Lou King
Development 2017 : dev.155978 doi: 10.1242/dev.155978 Published 20 November 2017
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The Xenopus primordial germ cell transcriptome identifies sox7: a novel role in early PGC development
Amanda M. Butler, Dawn A. Owens, Lingyu Wang, Mary Lou King
Development 2017 : dev.155978 doi: 10.1242/dev.155978 Published 20 November 2017

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