Table 2.

Summary of data for female and male genes

RAID***ESTCGBlot§Gene nameGO function**FvM wt††FvM tud††Model‡‡Model P§§FvdsxD¶¶MvFru¶¶
Female genes
   75H385.32107.16DSX**
   79G7CG17012YesPeptidase17.9118.49DSX**
   64B1017.9132.10DSX**
   61G12No6.6713.97DSX**
   75H7No4.4311.49DSX**
   86D9LD27313CG7777YesTransporter3.643.15DSX**
   75G4GH23040CG1090Transporter3.605.76DSX**
   88A8sopRibosomal_protein3.212.21DSX*
   88A7CG5821GRNA_binding2.912.25DSX*
   60F4GH08387CG8327Enzyme2.553.51DSX*
   85C11LD26157CG10281GTfIIFalphaTranscription_factor2.452.01DSX*
   98D8CG14792YesstaRibosomal_protein2.431.81FRU**
   45G122.411.40DSX*
   109G12CG1573PgkProtein_kinase2.352.09DSX*
   85E11LD26426CG1646DNA_binding2.311.67DSX*
   98H3CG10944RpS6Ribosomal_protein2.221.87FRU*
   89B6CG12269Unknown2.221.77FRU*
   107B5LD47943CG7899GEnzyme2.141.91DSX
   74E32.102.25FRU
   107A9LD47858CG8370GUnknown2.062.10DSX
   72B11CG3195GRpL12Ribosomal_protein2.062.03DSX
   109F12LP06017CG9699Cytoskeletal_structural_protein2.061.75FRU*
   40E112.062.10DSX
   49G4LD35056CG9696GDNA_binding2.041.56DSX*
   102H9LD44094CG11248Motor_protein2.041.97DSX
   78D9CG3751Ribosomal_protein2.031.96FRU
   102H11LD44138CG7129Signal_transduction1.951.54DSX
   75H6GH23156CG10566NoDefense/immunity_protein1.894.93DSX**
   109H12LP06937CG7702YesCell_adhesion1.861.57FRU*
   65D7GH13422CG4087RpP2Ribosomal_protein1.852.16DSX
   83B2GM13756CG12740YesRibosomal_protein1.801.82DSX
   78D7GH25190CG4392YesTransporter1.791.66FRU
   41E4GH14439CG18525Unknown1.792.83DSX*
   41H5GH14851CG8453Cyp6g1Cytochrome_P4501.671.50DSX
   68B61.661.91DSX
   34G1GH06693CG9547Acyl-CoA_dehydrogenase1.581.86DSX
   96E9LD37170CG8705Cytoskeletal_structural_protein1.381.44DSX
Male genes
   38G8GH1288CG7157YesAcp36DESignal_transduction218.3788.83DSX***
   65F5GH13755CG17022YesUnknown143.9576.82DSX**
   38A9GH10507CG18284YesUnknown62.7068.39DSX**
   75E2GH22889CG17843YesElectron_transfer36.5515.64DSX**
   54C10GH01346CG10096Unknown15.514.25DSX*
   70E7CG8708YesUnknown11.7216.46DSX**
   68B5GH15905CG12558YesEndopeptidase11.6211.39DSX*
   77H12CG7178Yes9.786.66FRU*
   76E9CG9519YesEnzyme9.407.38DSX**
   68B9GH15921CG16820Unknown8.224.39DSX*
   96C7Yes6.7212.60DSX**
   54F6No6.665.00DSX*
   30E3YesEndopeptidase6.132.04FRU*
   42C7GH152956.109.91DSX**
   65E3GH13557CG7342Transporter4.924.04DSX**
   77F5GH24480CG12268Enzyme4.642.17DSX*
   32E4GH04125CG9456Serpin4.302.15DSX*
   77H9GH24781CG6518inaCProtein_kinase4.231.30DSX*
   66D12GH14506CG8909YesReceptor3.162.17DSX**
   75B4GH22686CG6716YespairedTranscription_factor3.072.31DSX*
   74C9GH21941CG5449Receptor2.832.14DSX*
   34H9CG3359YesmfasSignal_transduction2.781.79FRU*
   40A5Rh4G_protein_linked_receptor2.691.55DSX*
   54A10Signal_transduction2.331.45DSX*
   72H52.241.31FRU*
   72B3GH19969CG8110YesSignal_transduction2.122.10DSX
   102D1LD43488CG5740GMotor_protein2.021.40FRU
   39D8GH11985CG14024Unknown2.011.58DSX*
   73F7GH21295CG5411Enzyme1.971.31FRU*
   55F5GH03013CG11605Actin_binding1.951.37DSX*
   70E1GH18278CG15097Actin_binding1.891.42DSX*
   61G11GH09582CG6844nAcRa-96AbIon_channel1.781.49DSX
   67D4GH15286CG5455Transcription_factor1.661.36DSX*
   81F10GH27701CG8552GLigand_binding_or_carrier1.591.41FRU
   34A10GH05937CG7050Cell_adhesion1.571.64DSX*
   40F6GH13452CG7748OstStt3Enzyme1.532.48DSX*
  • *** An arbitrary unique identifier (Arbeitman et al., 2002)

  • The BDGP unique identifier, if known. All BDGP ESTs were re-sequenced and those that did not match the expected EST have no designation. A `—' indicates that the EST is chimeric or from a contaminated well. 75H3 is a CG6666/CG3244 chimera; 64B10 is agbb/Yp1 chimera; 61G12 has two sequence populations in well; 75H7 has no apparent open reading frame; 88A8 is chimeric with non-Drosophila DNA; 45G12 is a ribosomal/P-element chimera; 74E3 is a ribosomal/no significant BLAST chimera; 44E11 is aCG7283 (ribosomal)/CG8536 (B-N-acetylglucosaminyl-glycopeptide β-1-4 galactosytransferase); 68B6 is a ribosomal/ion channel chimera; 96C7 has two sequence populations in well; 30E3 is a CG5023/CG4651 chimera; 54A10 and 72H5 contain a transposon sequence; 98D8 contains sequence from ribosomal and CG9243; 40A5 is an EST from either RH4 or sina, which are coded for on opposite strands; 74E3 contains sequence from ribosomal and CG6684; 40E11 chimera of two ribosomal genes

  • The celera-predicted gene based on the EST sequencing results presented here

  • § Results of RNA blot analysis. `Yes', `No' and `G' indicate that the RNA blot confirms or does not confirm the somatic sex differential expression, or is due to germline expression, respectively

  • The names of genes for those genes that have been previously studied

  • ** Predicted protein functions of the products of the ESTs

  • †† FvMwt and FvMtud, the fold difference in expression between all of the adult wild-type females and males, and all of the adult tudor female and male microarray data, respectively

  • ‡‡ The branch of the hierarchy that is predicted to regulate the gene, based on the statistical model presented (see Materials and methods)

  • §§ An asterisk indicates that the P value is less that 0.05 based on the model

  • ¶¶ An asterisk indicates that in one-tailed t-tests the P value is less than 0.05. The data in the tables are sorted: those showing the largest fold difference in expression between adult wild-type females and males are at the top, and the rest of the data is in descending order based on that criterion